RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 VWCEQ96DN2 955 aa8.69□□□□□ -1.02
VIM-207ENST00000495528 DHRS1Q96LJ7 313 aa8.69□□□□□ -1.02
VIM-207ENST00000495528 BSDC1Q9NW68 430 aaPredicted RBP8.69□□□□□ -1.02
VIM-207ENST00000495528 SUCOQ9UBS9 1254 aaKnown RBP8.69□□□□□ -1.02
VIM-207ENST00000495528 POLKQ9UBT6 870 aa8.69□□□□□ -1.02
VIM-207ENST00000495528 KCNH3Q9ULD8 1083 aa8.69□□□□□ -1.02
VIM-207ENST00000495528 LTBP3Q9NS15 1303 aa8.69□□□□□ -1.02
VIM-207ENST00000495528 NCAPD2Q15021 1401 aa8.69□□□□□ -1.02
VIM-207ENST00000495528 TOGARAM1Q9Y4F4 1720 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 TMEM265A0A087WTH1 108 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 A0A0G2JLW4 131 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 C9IYK1 514 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 HYAL3O43820 417 aaPredicted RBP8.68□□□□□ -1.02
VIM-207ENST00000495528 GTF2F1P35269 517 aaKnown RBP eCLIP8.68□□□□□ -1.02
VIM-207ENST00000495528 RNF4P78317 190 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 EIF4A2Q14240 407 aaKnown RBP8.68□□□□□ -1.02
VIM-207ENST00000495528 XP32Q5T750 250 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 DTX1Q86Y01 620 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 HRASLS5Q96KN8 279 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 ZSWIM5Q9P217 1185 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 TAF1LQ8IZX4 1826 aa8.68□□□□□ -1.02
VIM-207ENST00000495528 CEP350Q5VT06 3117 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 WASH4PA8MWX3 477 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 SPINK2P20155 84 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 TNNT2P45379 298 aaPredicted RBP8.67□□□□□ -1.02
VIM-207ENST00000495528 TGFB2P61812 414 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 LRP8Q14114 963 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 PPFIBP1Q86W92 1011 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 CCDC144CPQ8IYA2 1237 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 NLGN1Q8N2Q7 840 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 C19orf47Q8N9M1 422 aaKnown RBP8.67□□□□□ -1.02
VIM-207ENST00000495528 DHX38Q92620 1227 aaKnown RBP8.67□□□□□ -1.02
VIM-207ENST00000495528 FBXL18Q96ME1 805 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 ACTR10Q9NZ32 417 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 PRKAG3Q9UGI9 489 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 ST14Q9Y5Y6 855 aa8.67□□□□□ -1.02
VIM-207ENST00000495528 KIAA1324LA8MWY0 1029 aaPredicted RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 STK10O94804 968 aaKnown RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 DPEP1P16444 411 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 PMS1P54277 932 aaKnown RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 CASP7P55210 303 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 SNW1Q13573 536 aaKnown RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 GNPTABQ3T906 1256 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 TNNI3KQ59H18 835 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 LARP1BQ659C4 914 aaKnown RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 ANKS3Q6ZW76 656 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 HNRNPLLQ8WVV9 542 aaKnown RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 UBE2FQ969M7 185 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 CCDC39Q9UFE4 941 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 FBXL21Q9UKT6 434 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 R3HCC1Q9Y3T6 440 aaKnown RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 SLC12A7Q9Y666 1083 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 UBR3Q6ZT12 1888 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 MAP2P11137 1827 aaKnown RBP8.66□□□□□ -1.02
VIM-207ENST00000495528 ITGB4P16144 1822 aa8.66□□□□□ -1.02
VIM-207ENST00000495528 PXDNLA1KZ92 1463 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 ERVV-2B6SEH9 535 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 ADAMTS4O75173 837 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 RPS6KA4O75676 772 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 GYS1P13807 737 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 KCNA3P22001 575 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 CLCN7P51798 805 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 PRKCQQ04759 706 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 NBPF9Q3BBW0 867 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 BCL7CQ8WUZ0 217 aaPredicted RBP8.65□□□□□ -1.02
VIM-207ENST00000495528 POLR3GLQ9BT43 218 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 ATP13A1Q9HD20 1204 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 ZNF214Q9UL59 606 aaPredicted RBP8.65□□□□□ -1.02
VIM-207ENST00000495528 SLC5A6Q9Y289 635 aa8.65□□□□□ -1.02
VIM-207ENST00000495528 PKD1L3Q7Z443 1732 aa8.65□□□□□ -1.03
VIM-207ENST00000495528 KDRP35968 1356 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 SHISA3A0PJX4 238 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 TOMM70O94826 608 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 RFC4P35249 363 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 CLEC16AQ2KHT3 1053 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 PLEKHO1Q53GL0 409 aaPredicted RBP8.64□□□□□ -1.03
VIM-207ENST00000495528 AXDND1Q5T1B0 1012 aaPredicted RBP8.64□□□□□ -1.03
VIM-207ENST00000495528 DCAF15Q66K64 600 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 TMC3Q7Z5M5 1100 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 DNAJC5GQ8N7S2 189 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 FLCNQ8NFG4 579 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 PIWIL2Q8TC59 973 aaKnown RBP8.64□□□□□ -1.03
VIM-207ENST00000495528 PRDM14Q9GZV8 571 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 ASCC2Q9H1I8 757 aaPredicted RBP8.64□□□□□ -1.03
VIM-207ENST00000495528 DUSP15Q9H1R2 295 aaPredicted RBP8.64□□□□□ -1.03
VIM-207ENST00000495528 PHAXQ9H814 394 aaKnown RBP8.64□□□□□ -1.03
VIM-207ENST00000495528 NMRK2Q9NPI5 230 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 SEMA3GQ9NS98 782 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 VAV3Q9UKW4 847 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 SNX11Q9Y5W9 270 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 KIF20BQ96Q89 1820 aa8.64□□□□□ -1.03
VIM-207ENST00000495528 PITPNM2Q9BZ72 1349 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 HSP90AB1P08238 724 aaKnown RBP8.63□□□□□ -1.03
VIM-207ENST00000495528 SLC7A5Q01650 507 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 IKZF1Q13422 519 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 AUHQ13825 339 aaKnown RBP8.63□□□□□ -1.03
VIM-207ENST00000495528 SF3A1Q15459 793 aaKnown RBP8.63□□□□□ -1.03
VIM-207ENST00000495528 ARTNQ5T4W7 220 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms