RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 SLURP2P0DP57 97 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 EEF2P13639 858 aaKnown RBP17.08■□□□□ 0.33
CALD1-222ENST00000495522 IDEP14735 1019 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 CYLC1P35663 651 aaPredicted RBP17.08■□□□□ 0.33
CALD1-222ENST00000495522 SLC1A4P43007 532 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 LRRC63Q05C16 580 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 TCP10Q12799 353 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 SEPT2Q15019 361 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 QRICH1Q2TAL8 776 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 STRIP1Q5VSL9 837 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 KCNK18Q7Z418 384 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 KIAA0825Q8IV33 1275 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 IDI2Q9BXS1 227 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 PARD6BQ9BYG5 372 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 PCDHA12Q9UN75 941 aa17.08■□□□□ 0.33
CALD1-222ENST00000495522 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 KLK7P49862 253 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 CACNB3P54284 484 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 EHHADHQ08426 723 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 WHAMMP3Q1A5X7 153 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 SLFN13Q68D06 897 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 CC2D1AQ6P1N0 951 aaPredicted RBP17.08■□□□□ 0.32
CALD1-222ENST00000495522 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 CCDC170Q8IYT3 715 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 NT5C3AQ9H0P0 336 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 PUF60Q9UHX1 559 aaKnown RBP17.08■□□□□ 0.32
CALD1-222ENST00000495522 GUCA1BQ9UMX6 200 aa17.08■□□□□ 0.32
CALD1-222ENST00000495522 DDTLA6NHG4 134 aaPredicted RBP17.07■□□□□ 0.32
CALD1-222ENST00000495522 RAD21O60216 631 aa17.07■□□□□ 0.32
CALD1-222ENST00000495522 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
CALD1-222ENST00000495522 HERVK_113P62684 666 aa17.07■□□□□ 0.32
CALD1-222ENST00000495522 VWA3BQ502W6 1294 aa17.07■□□□□ 0.32
CALD1-222ENST00000495522 HYIQ5T013 277 aa17.07■□□□□ 0.32
CALD1-222ENST00000495522 FOXR2Q6PJQ5 311 aa17.07■□□□□ 0.32
CALD1-222ENST00000495522 ZSWIM4Q9H7M6 989 aa17.07■□□□□ 0.32
CALD1-222ENST00000495522 FAM198AQ9UFP1 575 aa17.07■□□□□ 0.32
CALD1-222ENST00000495522 PCDHA1Q9Y5I3 950 aa17.07■□□□□ 0.32
CALD1-222ENST00000495522 FAM196BA6NMK8 535 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP11P51784 963 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 CDK17Q00537 523 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 CDC37Q16543 378 aaPredicted RBP17.06■□□□□ 0.32
CALD1-222ENST00000495522 ECM1Q16610 540 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 DACT2Q5SW24 774 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 TSG101Q99816 390 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 PCDHAC2Q9Y5I4 1007 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L15C9J2P7 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L13C9JLJ4 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L11C9JVI0 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L18D6R9N7 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L22D6RA61 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L17D6RBQ6 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L19D6RCP7 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L20D6RJB6 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 POTEB2H3BUK9 544 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 SLC26A4O43511 780 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 ECE2O60344 883 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 SEC31AO94979 1220 aaKnown RBP17.06■□□□□ 0.32
CALD1-222ENST00000495522 IPO7O95373 1038 aaKnown RBP17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 MAN2A1Q16706 1144 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 TATDN1Q6P1N9 297 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 USP17L6PQ6QN14 398 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 KIAA1328Q86T90 577 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 C2CD5Q86YS7 1000 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 NDST4Q9H3R1 872 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 NHEJ1Q9H9Q4 299 aaPredicted RBP17.06■□□□□ 0.32
CALD1-222ENST00000495522 ARFGAP3Q9NP61 516 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 ARFGEF1Q9Y6D6 1849 aa17.06■□□□□ 0.32
CALD1-222ENST00000495522 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
CALD1-222ENST00000495522 PSMD14O00487 310 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 CCDC122Q5T0U0 273 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 EHBP1Q8NDI1 1231 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 GJA10Q969M2 543 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 DNAJC19Q96DA6 116 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
CALD1-222ENST00000495522 ANO3Q9BYT9 981 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 BMP2KQ9NSY1 1161 aaPredicted RBP17.05■□□□□ 0.32
CALD1-222ENST00000495522 TRIM10Q9UDY6 481 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 CYP3A7-CYP3A51PA0A087WV96 503 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 NKRFO15226 690 aaKnown RBP eCLIP17.05■□□□□ 0.32
CALD1-222ENST00000495522 KRT86O43790 486 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 CYP3A7P24462 503 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 AMPD2Q01433 879 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 ICA1Q05084 483 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 COASYQ13057 564 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 AP3B2Q13367 1082 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 BRD3Q15059 726 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 SHROOM1Q2M3G4 852 aaPredicted RBP17.05■□□□□ 0.32
CALD1-222ENST00000495522 TMEM179Q6ZVK1 233 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 SH3BP5LQ7L8J4 393 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 MYOCDQ8IZQ8 938 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 KCNMB3Q9NPA1 279 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 MYO6Q9UM54 1294 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
CALD1-222ENST00000495522 CCDC151A5D8V7 595 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 STYK1Q6J9G0 422 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 MOXD1Q6UVY6 613 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms