RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PGK1P00558 417 aa22.26■■□□□ 1.15
HDAC4-212ENST00000495497 GNA11P29992 359 aa22.26■■□□□ 1.15
HDAC4-212ENST00000495497 IQSEC1Q6DN90 963 aa22.26■■□□□ 1.15
HDAC4-212ENST00000495497 DIS3LQ8TF46 1054 aaKnown RBP22.26■■□□□ 1.15
HDAC4-212ENST00000495497 LLPHQ9BRT6 129 aaKnown RBP22.26■■□□□ 1.15
HDAC4-212ENST00000495497 ANO3Q9BYT9 981 aa22.26■■□□□ 1.15
HDAC4-212ENST00000495497 XPNPEP3Q9NQH7 507 aa22.26■■□□□ 1.15
HDAC4-212ENST00000495497 KIAA0100Q14667 2235 aaKnown RBP22.25■■□□□ 1.15
HDAC4-212ENST00000495497 MCM2P49736 904 aa22.25■■□□□ 1.15
HDAC4-212ENST00000495497 MNX1P50219 401 aaPredicted RBP22.25■■□□□ 1.15
HDAC4-212ENST00000495497 NPY5RQ15761 445 aa22.25■■□□□ 1.15
HDAC4-212ENST00000495497 REXO1Q8N1G1 1221 aaKnown RBP22.25■■□□□ 1.15
HDAC4-212ENST00000495497 WASF1Q92558 559 aa22.25■■□□□ 1.15
HDAC4-212ENST00000495497 COPS5Q92905 334 aa22.25■■□□□ 1.15
HDAC4-212ENST00000495497 GNEQ9Y223 722 aaKnown RBP22.25■■□□□ 1.15
HDAC4-212ENST00000495497 MYADML2A6NDP7 307 aa22.24■■□□□ 1.15
HDAC4-212ENST00000495497 DUSP11O75319 330 aaKnown RBP22.24■■□□□ 1.15
HDAC4-212ENST00000495497 FOSP01100 380 aaPredicted RBP22.24■■□□□ 1.15
HDAC4-212ENST00000495497 LY6KQ17RY6 165 aa22.24■■□□□ 1.15
HDAC4-212ENST00000495497 PCNX4Q63HM2 1172 aa22.24■■□□□ 1.15
HDAC4-212ENST00000495497 SCFD2Q8WU76 684 aa22.24■■□□□ 1.15
HDAC4-212ENST00000495497 PHF20Q9BVI0 1012 aa22.24■■□□□ 1.15
HDAC4-212ENST00000495497 PCDHA4Q9UN74 947 aa22.24■■□□□ 1.15
HDAC4-212ENST00000495497 SYNRGQ9UMZ2 1314 aa22.24■■□□□ 1.15
HDAC4-212ENST00000495497 DYNC1LI2O43237 492 aaPredicted RBP22.23■■□□□ 1.15
HDAC4-212ENST00000495497 ADAMTS4O75173 837 aa22.23■■□□□ 1.15
HDAC4-212ENST00000495497 TXNP10599 105 aaKnown RBP22.23■■□□□ 1.15
HDAC4-212ENST00000495497 AP3B2Q13367 1082 aa22.23■■□□□ 1.15
HDAC4-212ENST00000495497 LRRC41Q15345 812 aa22.23■■□□□ 1.15
HDAC4-212ENST00000495497 IFFO2Q5TF58 517 aa22.23■■□□□ 1.15
HDAC4-212ENST00000495497 BLIDQ8IZY5 108 aa22.23■■□□□ 1.15
HDAC4-212ENST00000495497 BICD2Q8TD16 824 aa22.23■■□□□ 1.15
HDAC4-212ENST00000495497 EHMT1Q9H9B1 1298 aa22.23■■□□□ 1.15
HDAC4-212ENST00000495497 FARP2O94887 1054 aaPredicted RBP22.22■■□□□ 1.15
HDAC4-212ENST00000495497 XBP1P17861 261 aa22.22■■□□□ 1.15
HDAC4-212ENST00000495497 TTLL4Q14679 1199 aa22.22■■□□□ 1.15
HDAC4-212ENST00000495497 DUSP28Q4G0W2 176 aa22.22■■□□□ 1.15
HDAC4-212ENST00000495497 CCDC62Q6P9F0 684 aa22.22■■□□□ 1.15
HDAC4-212ENST00000495497 TLK2Q86UE8 772 aa22.22■■□□□ 1.15
HDAC4-212ENST00000495497 TEX2Q8IWB9 1127 aa22.22■■□□□ 1.15
HDAC4-212ENST00000495497 OXER1Q8TDS5 423 aa22.22■■□□□ 1.15
HDAC4-212ENST00000495497 PAWRQ96IZ0 340 aaKnown RBP22.22■■□□□ 1.15
HDAC4-212ENST00000495497 MRVI1Q9Y6F6 885 aa22.22■■□□□ 1.15
HDAC4-212ENST00000495497 SORBS3O60504 671 aa22.21■■□□□ 1.15
HDAC4-212ENST00000495497 GJA9P57773 515 aa22.21■■□□□ 1.15
HDAC4-212ENST00000495497 BEX3Q00994 111 aa22.21■■□□□ 1.15
HDAC4-212ENST00000495497 ANKLE1Q8NAG6 615 aa22.21■■□□□ 1.15
HDAC4-212ENST00000495497 DAGLBQ8NCG7 672 aa22.21■■□□□ 1.15
HDAC4-212ENST00000495497 ARRDC4Q8NCT1 418 aa22.21■■□□□ 1.15
HDAC4-212ENST00000495497 DDX41Q9UJV9 622 aaKnown RBP22.21■■□□□ 1.15
HDAC4-212ENST00000495497 M0R2N6 131 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 CTAGE5O15320 804 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 C6orf222P0C671 652 aaPredicted RBP22.2■■□□□ 1.14
HDAC4-212ENST00000495497 SREBF1P36956 1147 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 HMGN5P82970 282 aaKnown RBP22.2■■□□□ 1.14
HDAC4-212ENST00000495497 ARHGAP4P98171 946 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 GUCY1B3Q02153 619 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 SEMA3FQ13275 785 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 KRT40Q6A162 431 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 XRRA1Q6P2D8 792 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 UBE2Q1Q7Z7E8 422 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 INPP4AQ96PE3 977 aaPredicted RBP22.2■■□□□ 1.14
HDAC4-212ENST00000495497 AP5M1Q9H0R1 490 aa22.2■■□□□ 1.14
HDAC4-212ENST00000495497 UPF3AQ9H1J1 476 aaKnown RBP22.2■■□□□ 1.14
HDAC4-212ENST00000495497 STAM2O75886 525 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 ITGB5P18084 799 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 SP2Q02086 613 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 RNF180Q86T96 592 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 FAM177A1Q8N128 213 aaPredicted RBP22.19■■□□□ 1.14
HDAC4-212ENST00000495497 FAM184AQ8NB25 1140 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 KLHDC9Q8NEP7 349 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 OR6J1Q8NGC5 347 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 CYP2W1Q8TAV3 490 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 BCAS3Q9H6U6 928 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 UBIAD1Q9Y5Z9 338 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 FRMPD3Q5JV73 1810 aa22.19■■□□□ 1.14
HDAC4-212ENST00000495497 KBTBD13C9JR72 458 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 DNM1LO00429 736 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 CAPN2P17655 700 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 RGS19P49795 217 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 KCNA10Q16322 511 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 MCTP2Q6DN12 878 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 GALNT17Q6IS24 598 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 NLRX1Q86UT6 975 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 CRYGNQ8WXF5 182 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 FERMT2Q96AC1 680 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 SPC25Q9HBM1 224 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 Q9Y3F1 56 aa22.18■■□□□ 1.14
HDAC4-212ENST00000495497 SPATA31C2B4DYI2 1134 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 NKRFO15226 690 aaKnown RBP eCLIP22.17■■□□□ 1.14
HDAC4-212ENST00000495497 EDIL3O43854 480 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 ICAM3P32942 547 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 ZNF76P36508 570 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 NR5A1Q13285 461 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 TRIM29Q14134 588 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 GNPTABQ3T906 1256 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 GNASQ5JWF2 1037 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 CCSAPQ6IQ19 270 aaPredicted RBP22.17■■□□□ 1.14
HDAC4-212ENST00000495497 NECAB2Q7Z6G3 386 aa22.17■■□□□ 1.14
HDAC4-212ENST00000495497 TBCKQ8TEA7 893 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms