RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 STK17AQ9UEE5 414 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 PCDHA12Q9UN75 941 aa20.77■□□□□ 0.92
TSPAN4-212ENST00000494815 GCOM1H8Y6P7 765 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 DDNO94850 711 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 RPN1P04843 607 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 POLR2MP0CAP2 368 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 HOXA13P31271 388 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 MTMR2Q13614 643 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 KRT79Q5XKE5 535 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 KRT222Q8N1A0 295 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 SLC26A4O43511 780 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 PTPRAP18433 802 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 KCNB1Q14721 858 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 KLRG1Q96E93 195 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 IMPACTQ9P2X3 320 aa20.76■□□□□ 0.91
TSPAN4-212ENST00000494815 POTEMA6NI47 508 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 VCAM1P19320 739 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 BACE1P56817 501 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 AMPD3Q01432 767 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 FMR1Q06787 632 aaKnown RBP eCLIP20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 TAF3Q5VWG9 929 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 PRAMEF18Q5VWM3 479 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 ZNF280CQ8ND82 737 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 LRRC15Q8TF66 581 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 CDK5RAP3Q96JB5 506 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 PLIN2Q99541 437 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 EMILIN3Q9NT22 766 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 TRMT1Q9NXH9 659 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 PNMA2Q9UL42 364 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 SLU7O95391 586 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 CFBP00751 764 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 YBX3P16989 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 SPP2Q13103 211 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 GRB10Q13322 594 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 ZNF658Q5TYW1 1059 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 SNX29Q8TEQ0 813 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 ZKSCAN4Q969J2 545 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 EHMT1Q9H9B1 1298 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 FAM53CQ9NYF3 392 aa20.75■□□□□ 0.91
TSPAN4-212ENST00000494815 FDX1P10109 184 aa20.74■□□□□ 0.91
TSPAN4-212ENST00000494815 NOL9Q5SY16 702 aaKnown RBP20.74■□□□□ 0.91
TSPAN4-212ENST00000494815 ETNPPLQ8TBG4 499 aa20.74■□□□□ 0.91
TSPAN4-212ENST00000494815 TANGO6Q9C0B7 1094 aa20.74■□□□□ 0.91
TSPAN4-212ENST00000494815 FANCLQ9NW38 375 aa20.74■□□□□ 0.91
TSPAN4-212ENST00000494815 CCPG1Q9ULG6 757 aa20.74■□□□□ 0.91
TSPAN4-212ENST00000494815 SSC5DA1L4H1 1573 aa20.74■□□□□ 0.91
TSPAN4-212ENST00000494815 ZNF536O15090 1300 aa20.74■□□□□ 0.91
TSPAN4-212ENST00000494815 PPP1R3GB7ZBB8 358 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 FANCCQ00597 558 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 PRR16Q569H4 304 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 SAMD1Q6SPF0 538 aaPredicted RBP20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 LENG9Q96B70 501 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 FAM20AQ96MK3 541 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 SLC38A10Q9HBR0 1119 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 PPP1R9AQ9ULJ8 1098 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 NFE2L3Q9Y4A8 694 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 SMCHD1A6NHR9 2005 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 CD44P16070 742 aaKnown RBP20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 TMEM119Q4V9L6 283 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 FBXO38Q6PIJ6 1188 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 FCHSD1Q86WN1 690 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 PNMA5Q96PV4 448 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 C7orf25Q9BPX7 421 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 IFNKQ9P0W0 207 aa20.73■□□□□ 0.91
TSPAN4-212ENST00000494815 KDM3AQ9Y4C1 1321 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 FAM86B1E9PN63 330 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 FLOT1O75955 427 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 FAM86B2P0C5J1 330 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 ATP1A3P13637 1013 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 ZNF18P17022 549 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 ELF2Q15723 593 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 HYIQ5T013 277 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 C12orf42Q96LP6 360 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 TRIM9Q9C026 710 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 XPO4Q9C0E2 1151 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 V9GYY5 206 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 C19orf81C9J6K1 198 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 CBFA2T2O43439 604 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 RHOBTB3O94955 611 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 GHRHRQ02643 423 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 C9orf131Q5VYM1 1079 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 CCDC47Q96A33 483 aaKnown RBP20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 MED15Q96RN5 788 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 NT5C3AQ9H0P0 336 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 RPAP3Q9H6T3 665 aaPredicted RBP20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 BLOC1S4Q9NUP1 217 aa20.72■□□□□ 0.91
TSPAN4-212ENST00000494815 SYNRGQ9UMZ2 1314 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 KLRC4O43908 158 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 HSD17B4P51659 736 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 SPATA1Q5VX52 437 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 SV2BQ7L1I2 683 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 CCDC150Q8NCX0 1101 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 TBC1D5Q92609 795 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 LARP4BQ92615 738 aaKnown RBP20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 AGBL1Q96MI9 1066 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 ZHX2Q9Y6X8 837 aa20.71■□□□□ 0.91
TSPAN4-212ENST00000494815 ZNF76P36508 570 aa20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 DGKZQ13574 1117 aa20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 TERF2Q15554 542 aa20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms