RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 PTGS1P23219 599 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 APOBRQ0VD83 1088 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 ITGA7Q13683 1181 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 GNPTABQ3T906 1256 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 CCDC62Q6P9F0 684 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 RUFY3Q7L099 469 aa20.31■□□□□ 0.84
HDAC4-211ENST00000494800 MTG1Q9BT17 334 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-211ENST00000494800 CNTNAP5Q8WYK1 1306 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 hCG_1642624A0A1W2PR95 340 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 A6NJR5 290 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 hCG_1984214I3L0E3 225 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 ARIH2O95376 493 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 CDK7P50613 346 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 LY6KQ17RY6 165 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 TEX2Q8IWB9 1127 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 TDHQ8IZJ6 230 aa20.3■□□□□ 0.84
HDAC4-211ENST00000494800 ZNF713Q8N859 430 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-211ENST00000494800 SPDYE3A6NKU9 549 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 KIAA0355O15063 1070 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 TGFB3P10600 412 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 PURAQ00577 322 aaKnown RBP20.29■□□□□ 0.84
HDAC4-211ENST00000494800 FAAP100Q0VG06 881 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 LAMC2Q13753 1193 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 PPP1R18Q6NYC8 613 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 XRRA1Q6P2D8 792 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 USP17L6PQ6QN14 398 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 COPS5Q92905 334 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 TM6SF1Q9BZW5 370 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 EHMT1Q9H9B1 1298 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 ZSWIM6Q9HCJ5 1215 aa20.29■□□□□ 0.84
HDAC4-211ENST00000494800 DDX41Q9UJV9 622 aaKnown RBP20.29■□□□□ 0.84
HDAC4-211ENST00000494800 V9GY48 417 aaPredicted RBP20.29■□□□□ 0.84
HDAC4-211ENST00000494800 TRIM43BA6NCK2 446 aa20.28■□□□□ 0.84
HDAC4-211ENST00000494800 MEIS2O14770 477 aa20.28■□□□□ 0.84
HDAC4-211ENST00000494800 NAPAP54920 295 aa20.28■□□□□ 0.84
HDAC4-211ENST00000494800 SH3RF1Q7Z6J0 888 aa20.28■□□□□ 0.84
HDAC4-211ENST00000494800 DHX37Q8IY37 1157 aaKnown RBP20.28■□□□□ 0.84
HDAC4-211ENST00000494800 BADQ92934 168 aa20.28■□□□□ 0.84
HDAC4-211ENST00000494800 TRIM43Q96BQ3 446 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-211ENST00000494800 AGXT2Q9BYV1 514 aa20.28■□□□□ 0.84
HDAC4-211ENST00000494800 GLT8D2Q9H1C3 349 aa20.28■□□□□ 0.84
HDAC4-211ENST00000494800 FRMPD4Q14CM0 1322 aa20.27■□□□□ 0.84
HDAC4-211ENST00000494800 BAZ2BQ9UIF8 2168 aaKnown RBP20.27■□□□□ 0.84
HDAC4-211ENST00000494800 AKAP17AQ02040 695 aaKnown RBP20.27■□□□□ 0.84
HDAC4-211ENST00000494800 ARHGAP1Q07960 439 aa20.27■□□□□ 0.84
HDAC4-211ENST00000494800 FAM126BQ8IXS8 530 aa20.27■□□□□ 0.84
HDAC4-211ENST00000494800 SLC43A3Q8NBI5 491 aa20.27■□□□□ 0.84
HDAC4-211ENST00000494800 IL31RAQ8NI17 732 aa20.27■□□□□ 0.84
HDAC4-211ENST00000494800 AFG1LQ8WV93 481 aa20.27■□□□□ 0.84
HDAC4-211ENST00000494800 GPKOWQ92917 476 aaPredicted RBP eCLIP20.27■□□□□ 0.84
HDAC4-211ENST00000494800 EMID1Q96A84 441 aaPredicted RBP20.27■□□□□ 0.84
HDAC4-211ENST00000494800 CDC27P30260 824 aa20.26■□□□□ 0.83
HDAC4-211ENST00000494800 ADD1P35611 737 aaKnown RBP20.26■□□□□ 0.83
HDAC4-211ENST00000494800 FXR1P51114 621 aaKnown RBP eCLIP20.26■□□□□ 0.83
HDAC4-211ENST00000494800 PSMC6P62333 389 aa20.26■□□□□ 0.83
HDAC4-211ENST00000494800 FUT2Q10981 343 aa20.26■□□□□ 0.83
HDAC4-211ENST00000494800 DGKDQ16760 1214 aa20.26■□□□□ 0.83
HDAC4-211ENST00000494800 PCNX4Q63HM2 1172 aa20.26■□□□□ 0.83
HDAC4-211ENST00000494800 WWC2Q6AWC2 1192 aa20.26■□□□□ 0.83
HDAC4-211ENST00000494800 NID2Q14112 1375 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 TIMP1P01033 207 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 MMP3P08254 477 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 SUPT20HL2P0C7V6 817 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 ADCY7P51828 1080 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 FAM47CQ5HY64 1035 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 NLRX1Q86UT6 975 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 PPTC7Q8NI37 304 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 CCDC12Q8WUD4 166 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-211ENST00000494800 MLXIPQ9HAP2 919 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 FAM217BQ9NTX9 383 aaPredicted RBP20.25■□□□□ 0.83
HDAC4-211ENST00000494800 BARHL2Q9NY43 387 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 TBX21Q9UL17 535 aa20.25■□□□□ 0.83
HDAC4-211ENST00000494800 FIBPO43427 364 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 RGS20O76081 388 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 EVCP57679 992 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 ANAPC15P60006 121 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 FPGSQ05932 587 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 NFRKBQ6P4R8 1299 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 CDHR1Q96JP9 859 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 INPP4AQ96PE3 977 aaPredicted RBP20.24■□□□□ 0.83
HDAC4-211ENST00000494800 KATNAL1Q9BW62 490 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
HDAC4-211ENST00000494800 RIC8AQ9NPQ8 531 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 PDRG1Q9NUG6 133 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 GRIN2DO15399 1336 aa20.24■□□□□ 0.83
HDAC4-211ENST00000494800 SMCO2A6NFE2 343 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 GGPS1O95749 300 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 FOSP01100 380 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-211ENST00000494800 CD4P01730 458 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 UBA1P22314 1058 aaKnown RBP20.23■□□□□ 0.83
HDAC4-211ENST00000494800 PDIA3P30101 505 aaKnown RBP20.23■□□□□ 0.83
HDAC4-211ENST00000494800 ICAM3P32942 547 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 MRPS9P82933 396 aaKnown RBP20.23■□□□□ 0.83
HDAC4-211ENST00000494800 PTPN11Q06124 597 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-211ENST00000494800 NEDD9Q14511 834 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 UBE2SQ16763 222 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 PFKFB3Q16875 520 aaPredicted RBP20.23■□□□□ 0.83
HDAC4-211ENST00000494800 CELF3Q5SZQ8 465 aaKnown RBP20.23■□□□□ 0.83
HDAC4-211ENST00000494800 TMEM199Q8N511 208 aa20.23■□□□□ 0.83
HDAC4-211ENST00000494800 SPATA33Q96N06 139 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms