RNA–Protein interactions for RNA: ENST00000494756.1

RPS27A-209, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-209ENST00000494756 ZNF543Q08ER8 600 aa12.2□□□□□ -0.46
RPS27A-209ENST00000494756 TCTN1Q2MV58 587 aa12.2□□□□□ -0.46
RPS27A-209ENST00000494756 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.2□□□□□ -0.46
RPS27A-209ENST00000494756 TMEM47Q9BQJ4 181 aa12.2□□□□□ -0.46
RPS27A-209ENST00000494756 GPCPD1Q9NPB8 672 aa12.2□□□□□ -0.46
RPS27A-209ENST00000494756 GTF2IRD1Q9UHL9 959 aa12.2□□□□□ -0.46
RPS27A-209ENST00000494756 GH1P01241 217 aa12.19□□□□□ -0.46
RPS27A-209ENST00000494756 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
RPS27A-209ENST00000494756 IL9P15248 144 aa12.19□□□□□ -0.46
RPS27A-209ENST00000494756 CHMP4BP1P59074 171 aa12.19□□□□□ -0.46
RPS27A-209ENST00000494756 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
RPS27A-209ENST00000494756 TRAF7Q6Q0C0 670 aa12.19□□□□□ -0.46
RPS27A-209ENST00000494756 RGS22Q8NE09 1264 aa12.19□□□□□ -0.46
RPS27A-209ENST00000494756 TCP11L1Q9NUJ3 509 aa12.19□□□□□ -0.46
RPS27A-209ENST00000494756 MICAL3Q7RTP6 2002 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 MYO7AQ13402 2215 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 F2P00734 622 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 ALADP13716 330 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 MBTPS1Q14703 1052 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 ALX1Q15699 326 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 TRIM71Q2Q1W2 868 aaKnown RBP12.18□□□□□ -0.46
RPS27A-209ENST00000494756 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 PTCRAQ6ISU1 281 aaPredicted RBP12.18□□□□□ -0.46
RPS27A-209ENST00000494756 ALYREFQ86V81 257 aaKnown RBP12.18□□□□□ -0.46
RPS27A-209ENST00000494756 NEK9Q8TD19 979 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 EMID1Q96A84 441 aaPredicted RBP12.18□□□□□ -0.46
RPS27A-209ENST00000494756 MAF1Q9H063 256 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 C5orf42Q9H799 3197 aa12.18□□□□□ -0.46
RPS27A-209ENST00000494756 COL4A6Q14031 1691 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 CASTP20810 708 aaKnown RBP12.17□□□□□ -0.46
RPS27A-209ENST00000494756 SSTR3P32745 418 aaPredicted RBP12.17□□□□□ -0.46
RPS27A-209ENST00000494756 PTK7Q13308 1070 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 IKBKEQ14164 716 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 DGKDQ16760 1214 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 LY6KQ17RY6 165 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 PUS10Q3MIT2 529 aaKnown RBP12.17□□□□□ -0.46
RPS27A-209ENST00000494756 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
RPS27A-209ENST00000494756 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
RPS27A-209ENST00000494756 WNT8BQ93098 351 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 MRPL38Q96DV4 380 aaKnown RBP12.17□□□□□ -0.46
RPS27A-209ENST00000494756 C17orf80Q9BSJ5 609 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 KATNAL1Q9BW62 490 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 HDAC6Q9UBN7 1215 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 INSL6Q9Y581 213 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
RPS27A-209ENST00000494756 HAS3O00219 553 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 LGR5O75473 907 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 HOXD8P13378 290 aaPredicted RBP12.16□□□□□ -0.46
RPS27A-209ENST00000494756 PSEN2P49810 448 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
RPS27A-209ENST00000494756 HTRA4P83105 476 aaPredicted RBP12.16□□□□□ -0.46
RPS27A-209ENST00000494756 COL19A1Q14993 1142 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 USH1GQ495M9 461 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 TIGD5Q53EQ6 642 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 RRP12Q5JTH9 1297 aaKnown RBP12.16□□□□□ -0.46
RPS27A-209ENST00000494756 GPATCH4Q5T3I0 446 aaKnown RBP12.16□□□□□ -0.46
RPS27A-209ENST00000494756 ZNF618Q5T7W0 954 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 FAM117BQ6P1L5 589 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 SEPT14Q6ZU15 432 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 C7orf31Q8N865 590 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 SYTL5Q8TDW5 730 aaPredicted RBP12.16□□□□□ -0.46
RPS27A-209ENST00000494756 NSUN6Q8TEA1 469 aaKnown RBP12.16□□□□□ -0.46
RPS27A-209ENST00000494756 CRBNQ96SW2 442 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 TOMM22Q9NS69 142 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 COL20A1Q9P218 1284 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
RPS27A-209ENST00000494756 ZMYM6O95789 1325 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 EMSYQ7Z589 1322 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 DCXO43602 365 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 ZNF286BP0CG31 522 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
RPS27A-209ENST00000494756 MX1P20591 662 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 MRE11P49959 708 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 MFSD10Q14728 455 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 STXBP2Q15833 593 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 PTPROQ16827 1216 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 KIAA0753Q2KHM9 967 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPS27A-209ENST00000494756 CHST3Q7LGC8 479 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 PPTC7Q8NI37 304 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 TTC14Q96N46 770 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 SAMD11Q96NU1 681 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 IWS1Q96ST2 819 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 KCNH6Q9H252 994 aa12.15□□□□□ -0.46
RPS27A-209ENST00000494756 DDX41Q9UJV9 622 aaKnown RBP12.15□□□□□ -0.46
RPS27A-209ENST00000494756 ABCB11O95342 1321 aa12.14□□□□□ -0.47
RPS27A-209ENST00000494756 SALL3Q9BXA9 1300 aa12.14□□□□□ -0.47
RPS27A-209ENST00000494756 CACNA1HO95180 2353 aa12.14□□□□□ -0.47
RPS27A-209ENST00000494756 H3BQ06 376 aaPredicted RBP12.14□□□□□ -0.47
RPS27A-209ENST00000494756 RBAK-RBAKDNI3L0D1 243 aa12.14□□□□□ -0.47
RPS27A-209ENST00000494756 FGAP02671 866 aa12.14□□□□□ -0.47
RPS27A-209ENST00000494756 AMHP03971 560 aa12.14□□□□□ -0.47
RPS27A-209ENST00000494756 NHLH1Q02575 133 aa12.14□□□□□ -0.47
RPS27A-209ENST00000494756 ZP2Q05996 745 aa12.14□□□□□ -0.47
RPS27A-209ENST00000494756 CDC37Q16543 378 aaPredicted RBP12.14□□□□□ -0.47
RPS27A-209ENST00000494756 CSPP1Q1MSJ5 1256 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms