RNA–Protein interactions for RNA: ENST00000494607.5

PQLC1-208, Transcript of PQ loop repeat containing 1, human

TSL 3

Gene PQLC1, Length 666 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PQLC1-208	ENST00000494607	UPF3A	Q9H1J1	476 aa	Known RBP	18.45	■□□□□ 0.54
PQLC1-208	ENST00000494607	C11orf49	Q9H6J7	331 aa		18.45	■□□□□ 0.54
PQLC1-208	ENST00000494607	GNE	Q9Y223	722 aa	Known RBP	18.45	■□□□□ 0.54
PQLC1-208	ENST00000494607	SMPD1	P17405	629 aa		18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	CST5	P28325	142 aa	Predicted RBP	18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	MNX1	P50219	401 aa	Predicted RBP	18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	GNPTAB	Q3T906	1256 aa		18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	GJC2	Q5T442	439 aa	Predicted RBP	18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	PCNX4	Q63HM2	1172 aa		18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	KCNV1	Q6PIU1	500 aa		18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	TLK2	Q86UE8	772 aa		18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	PCSK9	Q8NBP7	692 aa	Known RBP	18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	DIS3L	Q8TF46	1054 aa	Known RBP	18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	WASF1	Q92558	559 aa		18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	TSEN34	Q9BSV6	310 aa	Known RBP	18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.44	■□□□□ 0.54
PQLC1-208	ENST00000494607	LARGE1	O95461	756 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	C6orf222	P0C671	652 aa	Predicted RBP	18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	TXN	P10599	105 aa	Known RBP	18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	COL6A1	P12109	1028 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	XBP1	P17861	261 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	NKX3-2	P78367	333 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	SEPT14	Q6ZU15	432 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	REXO1	Q8N1G1	1221 aa	Known RBP	18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	NECAB1	Q8N987	351 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	IL31RA	Q8NI17	732 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	VPS54	Q9P1Q0	977 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	PCDHA6	Q9UN73	950 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	PCDHA8	Q9Y5H6	950 aa		18.43	■□□□□ 0.54
PQLC1-208	ENST00000494607	MOXD2P	A6NHM9	499 aa		18.42	■□□□□ 0.54
PQLC1-208	ENST00000494607	BRDT	Q58F21	947 aa	Predicted RBP	18.42	■□□□□ 0.54
PQLC1-208	ENST00000494607	KLHDC9	Q8NEP7	349 aa		18.42	■□□□□ 0.54
PQLC1-208	ENST00000494607	PHF24	Q9UPV7	400 aa		18.42	■□□□□ 0.54
PQLC1-208	ENST00000494607	MRVI1	Q9Y6F6	885 aa		18.42	■□□□□ 0.54
PQLC1-208	ENST00000494607	BRCA2	P51587	3418 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	DYNC1LI2	O43237	492 aa	Predicted RBP	18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	ZEB2	O60315	1214 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	TGFB3	P10600	412 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	MCM2	P49736	904 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	CLK2	P49760	499 aa	Known RBP	18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	CPT1A	P50416	773 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	NLRP5	P59047	1200 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	GNAS	Q5JWF2	1037 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	GALNT17	Q6IS24	598 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	CCDC62	Q6P9F0	684 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	NLRX1	Q86UT6	975 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	INPP4A	Q96PE3	977 aa	Predicted RBP	18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	ANO3	Q9BYT9	981 aa		18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	ORC3	Q9UBD5	711 aa	Predicted RBP	18.41	■□□□□ 0.54
PQLC1-208	ENST00000494607	CTDNEP1	O95476	244 aa		18.4	■□□□□ 0.54
PQLC1-208	ENST00000494607	GH1	P01241	217 aa		18.4	■□□□□ 0.54
PQLC1-208	ENST00000494607	MRPS9	P82933	396 aa	Known RBP	18.4	■□□□□ 0.54
PQLC1-208	ENST00000494607	FSCN1	Q16658	493 aa	Known RBP	18.4	■□□□□ 0.54
PQLC1-208	ENST00000494607	NSUN7	Q8NE18	718 aa	Known RBP	18.4	■□□□□ 0.54
PQLC1-208	ENST00000494607	OR6J1	Q8NGC5	347 aa		18.4	■□□□□ 0.54
PQLC1-208	ENST00000494607	LLPH	Q9BRT6	129 aa	Known RBP	18.4	■□□□□ 0.54
PQLC1-208	ENST00000494607	SENP6	Q9GZR1	1112 aa	Predicted RBP	18.4	■□□□□ 0.54
PQLC1-208	ENST00000494607	FIBP	O43427	364 aa		18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	RGS20	O76081	388 aa		18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	ACLY	P53396	1101 aa		18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	KCNA10	Q16322	511 aa		18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	JAKMIP3	Q5VZ66	844 aa		18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	CDHR1	Q96JP9	859 aa		18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	DDX41	Q9UJV9	622 aa	Known RBP	18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	PCDHA4	Q9UN74	947 aa		18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	KIAA1217	Q5T5P2	1943 aa		18.39	■□□□□ 0.53
PQLC1-208	ENST00000494607	MYADML2	A6NDP7	307 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	CTAGE5	O15320	804 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	CABYR	O75952	493 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	ARIH2	O95376	493 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	ICAM3	P32942	547 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	SREBF1	P36956	1147 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	LY6K	Q17RY6	165 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	TMEM63B	Q5T3F8	832 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	CCDC83	Q8IWF9	413 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	DAGLB	Q8NCG7	672 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	EMID1	Q96A84	441 aa	Predicted RBP	18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	GPRASP2	Q96D09	838 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	GLT1D1	Q96MS3	346 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	POLR3E	Q9NVU0	708 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607	TMEM260	Q9NX78	707 aa		18.38	■□□□□ 0.53
PQLC1-208	ENST00000494607		A0A1W2PQ45	241 aa	Predicted RBP	18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607		A0A1W2PQY0	241 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	ASGR1	P07306	291 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	HMGN5	P82970	282 aa	Known RBP	18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	BEX3	Q00994	111 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	LAMC2	Q13753	1193 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	DPF3	Q92784	378 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	FERMT2	Q96AC1	680 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	PGBD1	Q96JS3	809 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	AIFM3	Q96NN9	605 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	ALG1	Q9BT22	464 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607	RTEL1	Q9NZ71	1219 aa		18.37	■□□□□ 0.53
PQLC1-208	ENST00000494607		A6NJR5	290 aa		18.36	■□□□□ 0.53
PQLC1-208	ENST00000494607	SPATA31C2	B4DYI2	1134 aa		18.36	■□□□□ 0.53
PQLC1-208	ENST00000494607	MAFG	O15525	162 aa		18.36	■□□□□ 0.53
PQLC1-208	ENST00000494607	KPNA6	O60684	536 aa		18.36	■□□□□ 0.53
PQLC1-208	ENST00000494607	ELP1	O95163	1332 aa		18.36	■□□□□ 0.53
PQLC1-208	ENST00000494607	FDPS	P14324	419 aa	Known RBP	18.36	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms