RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 MRPL50Q8N5N7 158 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 KCTD17Q8N5Z5 321 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 MLKLQ8NB16 471 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 MDM1Q8TC05 714 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 DNAJC9Q8WXX5 260 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 RAPGEF5Q92565 580 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 CASP10Q92851 521 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ATP6V1G3Q96LB4 118 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 CCT7Q99832 543 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ELAC2Q9BQ52 826 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 TUBB2BQ9BVA1 445 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 CCDC68Q9H2F9 335 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 STIM2Q9P246 746 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 NFU1Q9UMS0 254 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 TRIM35Q9UPQ4 493 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 DOLKQ9UPQ8 538 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 SLC4A7Q9Y6M7 1214 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 AHDC1Q5TGY3 1603 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 SLIT1O75093 1534 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ZSCAN5CA6NGD5 496 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 A6NJR5 290 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 SPDYE16A6NNV3 312 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 PDE2AO00408 941 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 CTNND1O60716 968 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 ZPR1O75312 459 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 MYCP01106 439 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 ITGA2BP08514 1039 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 FAM153BP0C7A2 387 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 BCRP11274 1271 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ATP6V1C1P21283 382 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 YY1P25490 414 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 GBP1P32455 592 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 MSH2P43246 934 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 NLRP5P59047 1200 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 PHEXP78562 749 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 RESTQ13127 1097 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 PTK7Q13308 1070 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 RIPK1Q13546 671 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 IRF5Q13568 498 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 MAP7Q14244 749 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 STK38Q15208 465 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 CCDC6Q16204 474 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 FAM153CQ494X1 144 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 LACTB2Q53H82 288 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 CREB3L3Q68CJ9 461 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 OR52E8Q6IFG1 317 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 TRIM67Q6ZTA4 783 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ARHGEF25Q86VW2 580 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ZNF687Q8N1G0 1237 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 NELFBQ8WX92 580 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.42□□□□□ -1.7
ATG3-207ENST00000494571 LENG1Q96BZ8 264 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 MPP4Q96JB8 637 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 RPGRIP1Q96KN7 1286 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 TRAPPC9Q96Q05 1148 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 NUP85Q9BW27 656 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 PUS3Q9BZE2 481 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 NACAP1Q9BZK3 213 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 MIS12Q9H081 205 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 LUC7LQ9NQ29 371 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 DDX18Q9NVP1 670 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 EHD2Q9NZN4 543 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 FAM153AQ9UHL3 310 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 PCDHB8Q9UN66 801 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 CARD8Q9Y2G2 431 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 DIS3Q9Y2L1 958 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 TMED5Q9Y3A6 229 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 PCDHB13Q9Y5F0 798 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 CCDC61Q9Y6R9 512 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 MACROD2A1Z1Q3 448 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 TARSL2A2RTX5 802 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 CFAP73A6NFT4 308 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 TRAPPC3O43617 180 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ATP9AO75110 1047 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 DDHD2O94830 711 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 OXSR1O95747 527 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 SHBGP04278 402 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ZKSCAN1P17029 563 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 CXCR5P32302 372 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 IFNAR2P48551 515 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 TMED10P49755 219 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 EPHB4P54760 987 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 CKAP4Q07065 602 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 PNOCQ13519 176 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ZNF268Q14587 947 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 ZNF827Q17R98 1081 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 SHROOM1Q2M3G4 852 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 LRRC8BQ6P9F7 803 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 UBE2Q1Q7Z7E8 422 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 DCLK2Q8N568 766 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ARFGAP2Q8N6H7 521 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 SNX27Q96L92 541 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 ANKRD27Q96NW4 1050 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 PANX2Q96RD6 677 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 SELENOSQ9BQE4 189 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 CEP44Q9C0F1 390 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 HSD3B7Q9H2F3 369 aa4.42□□□□□ -1.7
ATG3-207ENST00000494571 METTL5Q9NRN9 209 aaKnown RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 TUBA8Q9NY65 449 aaPredicted RBP4.42□□□□□ -1.7
ATG3-207ENST00000494571 EURLQ9NYK6 297 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms