RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 DHX37Q8IY37 1157 aaKnown RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 TBC1D5Q92609 795 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 YTHDC1Q96MU7 727 aaKnown RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 TAAR1Q96RJ0 339 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 ZSCAN10Q96SZ4 725 aaPredicted RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 RAPGEFL1Q9UHV5 662 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 BDP1A6H8Y1 2624 aa11.24□□□□□ -0.61
UBR4-216ENST00000494503 COL4A4P53420 1690 aaPredicted RBP11.24□□□□□ -0.61
UBR4-216ENST00000494503 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 MYCLP12524 364 aaPredicted RBP11.23□□□□□ -0.61
UBR4-216ENST00000494503 PTPN11Q06124 597 aaPredicted RBP11.23□□□□□ -0.61
UBR4-216ENST00000494503 DGKDQ16760 1214 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 IMMTQ16891 758 aaKnown RBP11.23□□□□□ -0.61
UBR4-216ENST00000494503 QRICH1Q2TAL8 776 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 ASPRV1Q53RT3 343 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 GDF6Q6KF10 455 aaPredicted RBP11.23□□□□□ -0.61
UBR4-216ENST00000494503 LRRC8DQ7L1W4 858 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 DGKHQ86XP1 1220 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 CAGE1Q8TC20 777 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 PHOSPHO2Q8TCD6 241 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 SYTL5Q8TDW5 730 aaPredicted RBP11.23□□□□□ -0.61
UBR4-216ENST00000494503 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 RWDD1Q9H446 243 aaPredicted RBP11.23□□□□□ -0.61
UBR4-216ENST00000494503 COL20A1Q9P218 1284 aa11.23□□□□□ -0.61
UBR4-216ENST00000494503 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
UBR4-216ENST00000494503 EPOPA6NHQ4 379 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 BAIAP3O94812 1187 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 SELPP16109 830 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 TAP1Q03518 808 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 ARHGAP1Q07960 439 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 PTPRSQ13332 1948 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 IFIT1BQ5T764 474 aaKnown RBP11.22□□□□□ -0.61
UBR4-216ENST00000494503 HOMER1Q86YM7 354 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 GDPD5Q8WTR4 605 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 VWCEQ96DN2 955 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 KATNAL1Q9BW62 490 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 BRWD1Q9NSI6 2320 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 MTCH2Q9Y6C9 303 aa11.22□□□□□ -0.61
UBR4-216ENST00000494503 REV3LO60673 3130 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 HIP1O00291 1037 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 ARHGEF15O94989 841 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 PSEN2P49810 448 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 WDR5P61964 334 aaKnown RBP11.21□□□□□ -0.61
UBR4-216ENST00000494503 DEFB103AP81534 67 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 MFSD10Q14728 455 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 KIAA0753Q2KHM9 967 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 CCDC62Q6P9F0 684 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 ENAHQ8N8S7 591 aaPredicted RBP11.21□□□□□ -0.61
UBR4-216ENST00000494503 RGS22Q8NE09 1264 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 IWS1Q96ST2 819 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 KRT23Q9C075 422 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 PXMP2Q9NR77 195 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 HDAC6Q9UBN7 1215 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 CTNNA3Q9UI47 895 aa11.21□□□□□ -0.61
UBR4-216ENST00000494503 XIRP2A4UGR9 3374 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 LCHNA4D1U4 455 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 EIF3JO75822 258 aaKnown RBP11.2□□□□□ -0.62
UBR4-216ENST00000494503 NR3C2P08235 984 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 CKBP12277 381 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
UBR4-216ENST00000494503 TRDNQ13061 729 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 GRB10Q13322 594 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 LAMC2Q13753 1193 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 CNKSR3Q6P9H4 555 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 SPRED2Q7Z698 418 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 TICAM2Q86XR7 235 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 PIBF1Q8WXW3 757 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 KAT2BQ92831 832 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 HLA-CQ95604 372 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 ZFP91Q96JP5 570 aaPredicted RBP11.2□□□□□ -0.62
UBR4-216ENST00000494503 SPATA33Q96N06 139 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 AMNQ9BXJ7 453 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 CNNM2Q9H8M5 875 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 JMJD4Q9H9V9 463 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 ZSWIM5Q9P217 1185 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 GTF2IRD1Q9UHL9 959 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 TRANK1O15050 2925 aa11.2□□□□□ -0.62
UBR4-216ENST00000494503 ERICH2A1L162 156 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 RBAK-RBAKDNI3L0D1 243 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 GGPS1O95749 300 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 THPOP40225 353 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 ZNF200P98182 395 aaPredicted RBP11.19□□□□□ -0.62
UBR4-216ENST00000494503 IKBKEQ14164 716 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 MYOCDQ8IZQ8 938 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 PPTC7Q8NI37 304 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 DHX38Q92620 1227 aaKnown RBP11.19□□□□□ -0.62
UBR4-216ENST00000494503 MLXIPQ9HAP2 919 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 DDX41Q9UJV9 622 aaKnown RBP11.19□□□□□ -0.62
UBR4-216ENST00000494503 COG5Q9UP83 839 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 DOCK5Q9H7D0 1870 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 SIP14410 1827 aa11.19□□□□□ -0.62
UBR4-216ENST00000494503 KAT6AQ92794 2004 aa11.18□□□□□ -0.62
UBR4-216ENST00000494503 NOP56O00567 594 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms