RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 MICU3Q86XE3 530 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 SRBD1Q8N5C6 995 aaKnown RBP15.23■□□□□ 0.03
ERCC3-209ENST00000494464 FANCBQ8NB91 859 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 COPS5Q92905 334 aa15.23■□□□□ 0.03
ERCC3-209ENST00000494464 MTG1Q9BT17 334 aaPredicted RBP15.23■□□□□ 0.03
ERCC3-209ENST00000494464 TIMP1P01033 207 aa15.22■□□□□ 0.03
ERCC3-209ENST00000494464 GH1P01241 217 aa15.22■□□□□ 0.03
ERCC3-209ENST00000494464 RCAN1P53805 252 aa15.22■□□□□ 0.03
ERCC3-209ENST00000494464 ARHGAP1Q07960 439 aa15.22■□□□□ 0.03
ERCC3-209ENST00000494464 SYNE3Q6ZMZ3 975 aa15.22■□□□□ 0.03
ERCC3-209ENST00000494464 EMID1Q96A84 441 aaPredicted RBP15.22■□□□□ 0.03
ERCC3-209ENST00000494464 LRCH3Q96II8 777 aa15.22■□□□□ 0.03
ERCC3-209ENST00000494464 RBM28Q9NW13 759 aaKnown RBP15.22■□□□□ 0.03
ERCC3-209ENST00000494464 PIK3CDO00329 1044 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 MYL3P08590 195 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 CCND2P30279 289 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 PSMC6P62333 389 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 FPGSQ05932 587 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 MFSD5Q6N075 450 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 KCNV1Q6PIU1 500 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 VSIG10LQ86VR7 867 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 IL31RAQ8NI17 732 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 PIBF1Q8WXW3 757 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 TCEANC2Q96MN5 208 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 DDX41Q9UJV9 622 aaKnown RBP15.21■□□□□ 0.02
ERCC3-209ENST00000494464 MRVI1Q9Y6F6 885 aa15.21■□□□□ 0.02
ERCC3-209ENST00000494464 CNTNAP5Q8WYK1 1306 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 B4GALT4O60513 344 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 STAM2O75886 525 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 RGS20O76081 388 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 MMP3P08254 477 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 BECN1Q14457 450 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 LY6KQ17RY6 165 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 FCHSD1Q86WN1 690 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 RAB11FIP4Q86YS3 637 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 CMTR1Q8N1G2 835 aaKnown RBP15.2■□□□□ 0.02
ERCC3-209ENST00000494464 ALDH8A1Q9H2A2 487 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-209ENST00000494464 SNX14Q9Y5W7 946 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 TANC1Q9C0D5 1861 aa15.2■□□□□ 0.02
ERCC3-209ENST00000494464 NID2Q14112 1375 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 ZBTB43O43298 467 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 MYCLP12524 364 aaPredicted RBP15.19■□□□□ 0.02
ERCC3-209ENST00000494464 SHHQ15465 462 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 RTN1Q16799 776 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 C9orf50Q5SZB4 431 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 NFRKBQ6P4R8 1299 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 AFG1LQ8WV93 481 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 CUL5Q93034 780 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 JAKMIP1Q96N16 626 aaKnown RBP15.19■□□□□ 0.02
ERCC3-209ENST00000494464 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 MYH7BA7E2Y1 1941 aa15.19■□□□□ 0.02
ERCC3-209ENST00000494464 LAMA2P24043 3122 aaKnown RBP15.18■□□□□ 0.02
ERCC3-209ENST00000494464 KLF18A0A0U1RQI7 1052 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 MEIS2O14770 477 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 TGFB3P10600 412 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 EPHB4P54760 987 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 PTPN11Q06124 597 aaPredicted RBP15.18■□□□□ 0.02
ERCC3-209ENST00000494464 FUT2Q10981 343 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 LAMC2Q13753 1193 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 TEX2Q8IWB9 1127 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 FBXL16Q8N461 479 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 SMARCC2Q8TAQ2 1214 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 INPP4AQ96PE3 977 aaPredicted RBP15.18■□□□□ 0.02
ERCC3-209ENST00000494464 PPP1R12CQ9BZL4 782 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 HIPK3Q9H422 1215 aa15.18■□□□□ 0.02
ERCC3-209ENST00000494464 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
ERCC3-209ENST00000494464 GOLGA8AA7E2F4 631 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 GOLGA8BA8MQT2 603 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 SUPT20HL2P0C7V6 817 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 HOXD8P13378 290 aaPredicted RBP15.17■□□□□ 0.02
ERCC3-209ENST00000494464 UBA1P22314 1058 aaKnown RBP15.17■□□□□ 0.02
ERCC3-209ENST00000494464 MRPS9P82933 396 aaKnown RBP15.17■□□□□ 0.02
ERCC3-209ENST00000494464 PPIGQ13427 754 aaKnown RBP eCLIP15.17■□□□□ 0.022e-7■■□□□ 13.2
ERCC3-209ENST00000494464 GNPTABQ3T906 1256 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 PPP1R18Q6NYC8 613 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 XRRA1Q6P2D8 792 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 USP17L6PQ6QN14 398 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 TMEM199Q8N511 208 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 PPTC7Q8NI37 304 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 NOC4LQ9BVI4 516 aaKnown RBP15.17■□□□□ 0.02
ERCC3-209ENST00000494464 AGXT2Q9BYV1 514 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 TRPV6Q9H1D0 765 aa15.17■□□□□ 0.02
ERCC3-209ENST00000494464 hCG_1984214I3L0E3 225 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
ERCC3-209ENST00000494464 RPS6KB1P23443 525 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 PSMA5P28066 241 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 ICAM3P32942 547 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 FGD1P98174 961 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 DGKDQ16760 1214 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 NBPF20Q3BBV1 942 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 CELF3Q5SZQ8 465 aaKnown RBP15.16■□□□□ 0.02
ERCC3-209ENST00000494464 MYSM1Q5VVJ2 828 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 PCNX4Q63HM2 1172 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 SESTD1Q86VW0 696 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 DHX37Q8IY37 1157 aaKnown RBP15.16■□□□□ 0.02
ERCC3-209ENST00000494464 CCDC82Q8N4S0 544 aa15.16■□□□□ 0.02
ERCC3-209ENST00000494464 ZNF713Q8N859 430 aaPredicted RBP15.16■□□□□ 0.02
ERCC3-209ENST00000494464 RNPC3Q96LT9 517 aaKnown RBP15.16■□□□□ 0.02
ERCC3-209ENST00000494464 PSTPIP2Q9H939 334 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms