RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 VRTNQ9H8Y1 702 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 PSTPIP2Q9H939 334 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 RABGAP1Q9Y3P9 1069 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 ABCB11O95342 1321 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 USP17L10C9JJH3 530 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 TNFRSF10BO14763 440 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 ZNF202O95125 648 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 PFKFB1P16118 471 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 MARCKSP29966 332 aaPredicted RBP7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 CLK2P49760 499 aaKnown RBP7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 USP11P51784 963 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 RRP1BQ14684 758 aaKnown RBP7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 QRICH1Q2TAL8 776 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 ALKBH2Q6NS38 261 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 MIGA2Q7L4E1 593 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 CLEC10AQ8IUN9 316 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 SULF1Q8IWU6 871 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 PIBF1Q8WXW3 757 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 C12orf42Q96LP6 360 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 SLX1AQ9BQ83 275 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 RAB34Q9BZG1 259 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 RANBP17Q9H2T7 1088 aaKnown RBP7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 GGA3Q9NZ52 723 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 INTUQ9ULD6 942 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 MRPL11Q9Y3B7 192 aaKnown RBP7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 PCDHA1Q9Y5I3 950 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 A0A1W2PRG0 241 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 SHTN1A0MZ66 631 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 ANKRD33BA6NCL7 494 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 PIK3CDO00329 1044 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 HOXA7P31268 230 aaPredicted RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 ABL2P42684 1182 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 DMTNQ08495 405 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 ZRSR2Q15696 482 aaKnown RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 PPP4R3AQ6IN85 833 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 TTBK2Q6IQ55 1244 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 TYW1BQ6NUM6 668 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 DTHD1Q6ZMT9 781 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 PRPF38AQ8NAV1 312 aaKnown RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 NLRP7Q8WX94 980 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 GTPBP4Q9BZE4 634 aaKnown RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 NAT10Q9H0A0 1025 aaKnown RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 MAGEF1Q9HAY2 307 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 ANO10Q9NW15 660 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 KCNH3Q9ULD8 1083 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 MYPNQ86TC9 1320 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 PPP1R12BO60237 982 aaPredicted RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 YBX3P16989 372 aaKnown RBP eCLIP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 CALRP27797 417 aaKnown RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 EPS15P42566 896 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 NDUFA8P51970 172 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 PTGDRQ13258 359 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 GPR162Q16538 588 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 CT47A1Q5JQC4 288 aaPredicted RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 SHC4Q6S5L8 630 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 PNMA8AQ86V59 439 aaPredicted RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 TRPM4Q8TD43 1214 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 DUSP9Q99956 384 aaKnown RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 FUCA2Q9BTY2 467 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 GOLPH3LQ9H4A5 285 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 DDX56Q9NY93 547 aaKnown RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 PRKAG2Q9UGJ0 569 aa7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 FARP1Q9Y4F1 1045 aaPredicted RBP7.54□□□□□ -1.2
FNDC3B-212ENST00000494000 A0A1B0GVL5 298 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 GLTPD2A6NH11 291 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 PES1O00541 588 aaKnown RBP7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 DDNO94850 711 aaPredicted RBP7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 EGFRP00533 1210 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 MYL1P05976 194 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 JAG1P78504 1218 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 ZNF174Q15697 407 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 STX1AQ16623 288 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 TMEM266Q2M3C6 531 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 NBPF12Q5TAG4 269 aaPredicted RBP7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 ZNF280CQ8ND82 737 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 ACER1Q8TDN7 264 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 TAF4BQ92750 862 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 COA7Q96BR5 231 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 KLRG1Q96E93 195 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 CUEDC2Q9H467 287 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 PTPRHQ9HD43 1115 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 NEMFO60524 1076 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 HIP1RO75146 1068 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 S100BP04271 92 aaPredicted RBP7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 OR52Z1P0C646 297 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 VEGFAP15692 232 aaPredicted RBP7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 CD53P19397 219 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 ATP2B1P20020 1258 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 MCM7P33993 719 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 SLC16A2P36021 539 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 ECE1P42892 770 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 IREB2P48200 963 aaKnown RBP7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 OAZ1P54368 228 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 AMPD3Q01432 767 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 TYRO3Q06418 890 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 INF2Q27J81 1249 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 FAM83BQ5T0W9 1011 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 MCF2L2Q86YR7 1114 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 TRIML1Q8N9V2 468 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms