RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 USP53Q70EK8 1073 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 AMIGO3Q86WK7 504 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 FAM129CQ86XR2 697 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 SIAH1Q8IUQ4 282 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 SREK1Q8WXA9 508 aaKnown RBP5.8□□□□□ -1.48
CD46-217ENST00000493796 TRMT2BQ96GJ1 504 aaKnown RBP5.8□□□□□ -1.48
CD46-217ENST00000493796 TMEM169Q96HH4 297 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 RNF38Q9H0F5 515 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 BCAS3Q9H6U6 928 aa5.8□□□□□ -1.48
CD46-217ENST00000493796 H7BY64 318 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 ADCY3O60266 1144 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 NCAM1P13591 858 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 ATF2P15336 505 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 PMLP29590 882 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 SLC6A11P48066 632 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 SSRP1Q08945 709 aaKnown RBP5.79□□□□□ -1.48
CD46-217ENST00000493796 NTRK3Q16288 839 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 SOGA3Q5TF21 947 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 CNKSR3Q6P9H4 555 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 RSPO2Q6UXX9 243 aaPredicted RBP5.79□□□□□ -1.48
CD46-217ENST00000493796 LRP10Q7Z4F1 713 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 DACT3Q96B18 629 aaPredicted RBP5.79□□□□□ -1.48
CD46-217ENST00000493796 AP5M1Q9H0R1 490 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 GPR27Q9NS67 375 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 PFDN2Q9UHV9 154 aa5.79□□□□□ -1.48
CD46-217ENST00000493796 FAM221BA6H8Z2 402 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 SGSM2O43147 1006 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 DIAPH1O60610 1272 aaKnown RBP5.78□□□□□ -1.48
CD46-217ENST00000493796 IFRD2Q12894 506 aaPredicted RBP5.78□□□□□ -1.48
CD46-217ENST00000493796 TMEM151BQ8IW70 566 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 DCAF4Q8WV16 495 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 SEC14L1Q92503 715 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 CHAMP1Q96JM3 812 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 DEPDC7Q96QD5 511 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 PHF20Q9BVI0 1012 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 CLDND1Q9NY35 253 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 SNTG2Q9NY99 539 aa5.78□□□□□ -1.48
CD46-217ENST00000493796 COA3Q9Y2R0 106 aaPredicted RBP5.78□□□□□ -1.48
CD46-217ENST00000493796 MSCO60682 206 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 MC3RP41968 323 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 LIMS1P48059 325 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 AFF3P51826 1226 aaKnown RBP5.77□□□□□ -1.49
CD46-217ENST00000493796 TCERG1LQ5VWI1 586 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 KCNT2Q6UVM3 1135 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 B3GNT8Q7Z7M8 397 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 NPM2Q86SE8 214 aaKnown RBP5.77□□□□□ -1.49
CD46-217ENST00000493796 ZBTB38Q8NAP3 1195 aaPredicted RBP5.77□□□□□ -1.49
CD46-217ENST00000493796 PMFBP1Q8TBY8 1022 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 CPA5Q8WXQ8 436 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 MKL1Q969V6 931 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
CD46-217ENST00000493796 BLACEA4D250 179 aa5.76□□□□□ -1.49
CD46-217ENST00000493796 FOXO4P98177 505 aa5.76□□□□□ -1.49
CD46-217ENST00000493796 CACNB2Q08289 660 aaPredicted RBP5.76□□□□□ -1.49
CD46-217ENST00000493796 STYK1Q6J9G0 422 aa5.76□□□□□ -1.49
CD46-217ENST00000493796 SCUBE1Q8IWY4 988 aa5.76□□□□□ -1.49
CD46-217ENST00000493796 PWWP2AQ96N64 755 aa5.76□□□□□ -1.49
CD46-217ENST00000493796 DNAJC2Q99543 621 aaKnown RBP5.76□□□□□ -1.49
CD46-217ENST00000493796 ZFYVE21Q9BQ24 234 aa5.76□□□□□ -1.49
CD46-217ENST00000493796 PALD1Q9ULE6 856 aa5.76□□□□□ -1.49
CD46-217ENST00000493796 FAN1Q9Y2M0 1017 aa5.76□□□□□ -1.49
CD46-217ENST00000493796 ARID1BQ8NFD5 2236 aaPredicted RBP5.76□□□□□ -1.49
CD46-217ENST00000493796 KDM2BQ8NHM5 1336 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 TRBV23-1A0A0A0MS06 115 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 PLA2G1BP04054 148 aaKnown RBP5.75□□□□□ -1.49
CD46-217ENST00000493796 FAM153BP0C7A2 387 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 CAP1Q01518 475 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 CHRNA2Q15822 529 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 LONRF2Q1L5Z9 754 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 FBLN7Q53RD9 439 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 FOXB2Q5VYV0 432 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 LBX2Q6XYB7 198 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 MILR1Q7Z6M3 343 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 MIB1Q86YT6 1006 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 NLGN1Q8N2Q7 840 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 SRPK1Q96SB4 655 aaKnown RBP5.75□□□□□ -1.49
CD46-217ENST00000493796 CDC6Q99741 560 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 EPB41L1Q9H4G0 881 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 PPARGC1AQ9UBK2 798 aaKnown RBP5.75□□□□□ -1.49
CD46-217ENST00000493796 ZNF652Q9Y2D9 606 aa5.75□□□□□ -1.49
CD46-217ENST00000493796 HGSO14964 777 aaPredicted RBP5.74□□□□□ -1.49
CD46-217ENST00000493796 TADA3O75528 432 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 DGKIO75912 1065 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 GPR85P60893 370 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 HTRA3P83110 453 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 EMC4Q5J8M3 183 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 FAM209AQ5JX71 171 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 ETV3LQ6ZN32 361 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 DPH6Q7L8W6 267 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 IFNL3Q8IZI9 196 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 SMARCC2Q8TAQ2 1214 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.74□□□□□ -1.49
CD46-217ENST00000493796 FNIP1Q8TF40 1166 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.74□□□□□ -1.49
CD46-217ENST00000493796 EXOC2Q96KP1 924 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 ASXL2Q76L83 1435 aa5.74□□□□□ -1.49
CD46-217ENST00000493796 C8BP07358 591 aa5.73□□□□□ -1.49
CD46-217ENST00000493796 SUMO1P63165 101 aaKnown RBP5.73□□□□□ -1.49
CD46-217ENST00000493796 KIZQ2M2Z5 673 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms