RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 MRPL11Q9Y3B7 192 aaKnown RBP20.29■□□□□ 0.84
COL9A1-210ENST00000493682 MUC3AQ02505 3323 aa20.29■□□□□ 0.84
COL9A1-210ENST00000493682 RFXAPO00287 272 aa20.28■□□□□ 0.84
COL9A1-210ENST00000493682 DHX16O60231 1041 aaKnown RBP20.28■□□□□ 0.84
COL9A1-210ENST00000493682 PARP1P09874 1014 aaKnown RBP20.28■□□□□ 0.84
COL9A1-210ENST00000493682 IMMTQ16891 758 aaKnown RBP20.28■□□□□ 0.84
COL9A1-210ENST00000493682 GDF6Q6KF10 455 aaPredicted RBP20.28■□□□□ 0.84
COL9A1-210ENST00000493682 HERC6Q8IVU3 1022 aa20.28■□□□□ 0.84
COL9A1-210ENST00000493682 TSPYL2Q9H2G4 693 aaPredicted RBP20.28■□□□□ 0.84
COL9A1-210ENST00000493682 CERS4Q9HA82 394 aa20.28■□□□□ 0.84
COL9A1-210ENST00000493682 U3KPZ7 1027 aaPredicted RBP20.28■□□□□ 0.84
COL9A1-210ENST00000493682 EPOPA6NHQ4 379 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 HIP1O00291 1037 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 ARHGEF15O94989 841 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 EIF2AK2P19525 551 aaKnown RBP20.27■□□□□ 0.84
COL9A1-210ENST00000493682 CASTP20810 708 aaKnown RBP20.27■□□□□ 0.84
COL9A1-210ENST00000493682 ARHGEF16Q5VV41 709 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 CCDC155Q8N6L0 562 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 IL27Q8NEV9 243 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 CAGE1Q8TC20 777 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 UHRF1Q96T88 793 aaPredicted RBP20.27■□□□□ 0.84
COL9A1-210ENST00000493682 KRT23Q9C075 422 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 CTNNA3Q9UI47 895 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 DDX41Q9UJV9 622 aaKnown RBP20.27■□□□□ 0.84
COL9A1-210ENST00000493682 MTCH2Q9Y6C9 303 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 REV3LO60673 3130 aa20.27■□□□□ 0.84
COL9A1-210ENST00000493682 EIF3JO75822 258 aaKnown RBP20.26■□□□□ 0.83
COL9A1-210ENST00000493682 BAIAP3O94812 1187 aa20.26■□□□□ 0.83
COL9A1-210ENST00000493682 POU3F3P20264 500 aaPredicted RBP20.26■□□□□ 0.83
COL9A1-210ENST00000493682 TAP1Q03518 808 aa20.26■□□□□ 0.83
COL9A1-210ENST00000493682 GPNMBQ14956 572 aa20.26■□□□□ 0.83
COL9A1-210ENST00000493682 DGKDQ16760 1214 aa20.26■□□□□ 0.83
COL9A1-210ENST00000493682 AFAP1L1Q8TED9 768 aa20.26■□□□□ 0.83
COL9A1-210ENST00000493682 DHX38Q92620 1227 aaKnown RBP20.26■□□□□ 0.83
COL9A1-210ENST00000493682 UBAC1Q9BSL1 405 aa20.26■□□□□ 0.83
COL9A1-210ENST00000493682 PXMP2Q9NR77 195 aa20.26■□□□□ 0.83
COL9A1-210ENST00000493682 TRANK1O15050 2925 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 KIF28PB7ZC32 967 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 OPLAHO14841 1288 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 CFBP00751 764 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 NR3C2P08235 984 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 STAG2Q8N3U4 1231 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 ARNTL2Q8WYA1 636 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 EMID1Q96A84 441 aaPredicted RBP20.25■□□□□ 0.83
COL9A1-210ENST00000493682 AMNQ9BXJ7 453 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 CNNM2Q9H8M5 875 aa20.25■□□□□ 0.83
COL9A1-210ENST00000493682 KIAA1217Q5T5P2 1943 aa20.24■□□□□ 0.83
COL9A1-210ENST00000493682 GTPBP6O43824 516 aaPredicted RBP20.24■□□□□ 0.83
COL9A1-210ENST00000493682 SELPP16109 830 aa20.24■□□□□ 0.83
COL9A1-210ENST00000493682 HSD17B4P51659 736 aa20.24■□□□□ 0.83
COL9A1-210ENST00000493682 TFF2Q03403 129 aa20.24■□□□□ 0.83
COL9A1-210ENST00000493682 SKIV2LQ15477 1246 aaKnown RBP20.24■□□□□ 0.83
COL9A1-210ENST00000493682 IFIT1BQ5T764 474 aaKnown RBP20.24■□□□□ 0.83
COL9A1-210ENST00000493682 LRRC8DQ7L1W4 858 aa20.24■□□□□ 0.83
COL9A1-210ENST00000493682 HDAC6Q9UBN7 1215 aa20.24■□□□□ 0.83
COL9A1-210ENST00000493682 GTF2IRD1Q9UHL9 959 aa20.24■□□□□ 0.83
COL9A1-210ENST00000493682 MRVI1Q9Y6F6 885 aa20.24■□□□□ 0.83
COL9A1-210ENST00000493682 TET1Q8NFU7 2136 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 KLRF2D3W0D1 207 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 PPP1R11O60927 126 aaPredicted RBP20.23■□□□□ 0.83
COL9A1-210ENST00000493682 BMP1P13497 986 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 KCNJ6P48051 423 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 PSEN2P49810 448 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 WDR5P61964 334 aaKnown RBP20.23■□□□□ 0.83
COL9A1-210ENST00000493682 GHRHRQ02643 423 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 RBL2Q08999 1139 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 LAMC2Q13753 1193 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 KRT40Q6A162 431 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 C7orf31Q8N865 590 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 PPTC7Q8NI37 304 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 MTMR8Q96EF0 704 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 IL25Q9H293 177 aa20.23■□□□□ 0.83
COL9A1-210ENST00000493682 MYH6P13533 1939 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 TLL1O43897 1013 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 NBNO60934 754 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 F2P00734 622 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 ZNF286BP0CG31 522 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 CKBP12277 381 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 MFSD10Q14728 455 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 SEC23AQ15436 765 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 AAK1Q2M2I8 961 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 DHX37Q8IY37 1157 aaKnown RBP20.22■□□□□ 0.83
COL9A1-210ENST00000493682 NECAB3Q96P71 396 aaPredicted RBP20.22■□□□□ 0.83
COL9A1-210ENST00000493682 PDCD2LQ9BRP1 358 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 ALG1Q9BT22 464 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 KATNAL1Q9BW62 490 aa20.22■□□□□ 0.83
COL9A1-210ENST00000493682 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
COL9A1-210ENST00000493682 HAS3O00219 553 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 RGS20O76081 388 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 PARNO95453 639 aaKnown RBP20.21■□□□□ 0.83
COL9A1-210ENST00000493682 CXCL10P02778 98 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 KIAA0753Q2KHM9 967 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 CNKSR3Q6P9H4 555 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 STOX1Q6ZVD7 989 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 CYB5R4Q7L1T6 521 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 SPRED2Q7Z698 418 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 TMCO2Q7Z6W1 182 aaPredicted RBP20.21■□□□□ 0.83
COL9A1-210ENST00000493682 EXOC6Q8TAG9 804 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 MAD2L2Q9UI95 211 aa20.21■□□□□ 0.83
COL9A1-210ENST00000493682 PCDHA1Q9Y5I3 950 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms