RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 VSIG10LQ86VR7 867 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 CUL5Q93034 780 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 TRIM43Q96BQ3 446 aaPredicted RBP10.88□□□□□ -0.67
SGIP1-213ENST00000493564 NCOA5Q9HCD5 579 aaKnown RBP10.88□□□□□ -0.67
SGIP1-213ENST00000493564 PDRG1Q9NUG6 133 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 Q9Y3F1 56 aa10.88□□□□□ -0.67
SGIP1-213ENST00000493564 ZEB2O60315 1214 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 DTNBO60941 627 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 RGS20O76081 388 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 PDIA3P30101 505 aaKnown RBP10.87□□□□□ -0.67
SGIP1-213ENST00000493564 NAPAP54920 295 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 NKX3-2P78367 333 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 STK3Q13188 491 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 CCDC62Q6P9F0 684 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 SAMD3Q8N6K7 520 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 AFG1LQ8WV93 481 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 PHKBQ93100 1093 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 BCAS3Q9H6U6 928 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 TMEM39AQ9NV64 488 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 PRKAG2Q9UGJ0 569 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 DDX41Q9UJV9 622 aaKnown RBP10.87□□□□□ -0.67
SGIP1-213ENST00000493564 MRVI1Q9Y6F6 885 aa10.87□□□□□ -0.67
SGIP1-213ENST00000493564 GRIN2DO15399 1336 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 ELP1O95163 1332 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
SGIP1-213ENST00000493564 CCDC196A0A1B0GTZ2 297 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 SMCO2A6NFE2 343 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 ARVCFO00192 962 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 NKRFO15226 690 aaKnown RBP eCLIP10.86□□□□□ -0.67
SGIP1-213ENST00000493564 ITGB8P26012 769 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 CCND2P30279 289 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 MRPS9P82933 396 aaKnown RBP10.86□□□□□ -0.67
SGIP1-213ENST00000493564 SP2Q02086 613 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 FAAP100Q0VG06 881 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 ITGA7Q13683 1181 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 C1orf53Q5VUE5 145 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 FBXL16Q8N461 479 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 BADQ92934 168 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 PGBD1Q96JS3 809 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
SGIP1-213ENST00000493564 AGXT2Q9BYV1 514 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 TM6SF1Q9BZW5 370 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 UBE2OQ9C0C9 1292 aaKnown RBP10.86□□□□□ -0.67
SGIP1-213ENST00000493564 PDLIM7Q9NR12 457 aa10.86□□□□□ -0.67
SGIP1-213ENST00000493564 RANBP2P49792 3224 aaKnown RBP10.85□□□□□ -0.67
SGIP1-213ENST00000493564 LRRC37A2A6NM11 1700 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 STXBP3O00186 592 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 PIK3CDO00329 1044 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 GH1P01241 217 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 CLTBP09497 229 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 CPT1AP50416 773 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 CDK7P50613 346 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 ARHGAP1Q07960 439 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 BRDTQ58F21 947 aaPredicted RBP10.85□□□□□ -0.67
SGIP1-213ENST00000493564 GDF15Q99988 308 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 SLC26A6Q9BXS9 759 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 TRPV6Q9H1D0 765 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 TMEM260Q9NX78 707 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 PCDHA6Q9UN73 950 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 PCDHA8Q9Y5H6 950 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 TRIOBPQ9H2D6 2365 aa10.85□□□□□ -0.67
SGIP1-213ENST00000493564 A6NJR5 290 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 SPDYE3A6NKU9 549 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 ADAMTS3O15072 1205 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 PRPF3O43395 683 aaKnown RBP10.84□□□□□ -0.67
SGIP1-213ENST00000493564 CABYRO75952 493 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 GGPS1O95749 300 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 RCAN1P53805 252 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 EVCP57679 992 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
SGIP1-213ENST00000493564 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
SGIP1-213ENST00000493564 NTRK3Q16288 839 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 PKN1Q16512 942 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 PFKFB3Q16875 520 aaPredicted RBP10.84□□□□□ -0.67
SGIP1-213ENST00000493564 NBPF20Q3BBV1 942 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 ANKRD33Q7Z3H0 272 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 DHX37Q8IY37 1157 aaKnown RBP10.84□□□□□ -0.67
SGIP1-213ENST00000493564 TOX2Q96NM4 488 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 MTG1Q9BT17 334 aaPredicted RBP10.84□□□□□ -0.67
SGIP1-213ENST00000493564 RIC8AQ9NPQ8 531 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 POLR3EQ9NVU0 708 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 BARHL2Q9NY43 387 aa10.84□□□□□ -0.67
SGIP1-213ENST00000493564 B4GALT4O60513 344 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 MMP3P08254 477 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 SCG2P13521 617 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 RAG1P15918 1043 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 UBA1P22314 1058 aaKnown RBP10.83□□□□□ -0.68
SGIP1-213ENST00000493564 ADCY7P51828 1080 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 SEMA3FQ13275 785 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 LAMC2Q13753 1193 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 FAM47CQ5HY64 1035 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 CELF3Q5SZQ8 465 aaKnown RBP10.83□□□□□ -0.68
SGIP1-213ENST00000493564 MYSM1Q5VVJ2 828 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 JAKMIP3Q5VZ66 844 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 PCNX4Q63HM2 1172 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 CYFIP1Q7L576 1253 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 FAM126BQ8IXS8 530 aa10.83□□□□□ -0.68
SGIP1-213ENST00000493564 SLC43A3Q8NBI5 491 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms