RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 FBXO41Q8TF61 875 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 DYNLL2Q96FJ2 89 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 GTPBP4Q9BZE4 634 aaKnown RBP11.41□□□□□ -0.58
PRPF3-206ENST00000493553 FTOQ9C0B1 505 aaKnown RBP eCLIP11.41□□□□□ -0.58
PRPF3-206ENST00000493553 GOLPH3LQ9H4A5 285 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 CBX8Q9HC52 389 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 C6orf50Q9HD87 102 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 CABP5Q9NP86 173 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 IL17RBQ9NRM6 502 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 TMOD2Q9NZR1 351 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 VPS54Q9P1Q0 977 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 KCNJ14Q9UNX9 436 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 DLEC1Q9Y238 1755 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 MYH2Q9UKX2 1941 aa11.41□□□□□ -0.58
PRPF3-206ENST00000493553 QSER1Q2KHR3 1735 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 COL2A1P02458 1487 aaPredicted RBP11.4□□□□□ -0.58
PRPF3-206ENST00000493553 CCDC194A0A1B0GVG4 234 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 A0A1B0GVL5 298 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 ESYT2A0FGR8 921 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 KLRF2D3W0D1 207 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 WDHD1O75717 1129 aaPredicted RBP11.4□□□□□ -0.58
PRPF3-206ENST00000493553 MARCKSP29966 332 aaPredicted RBP11.4□□□□□ -0.58
PRPF3-206ENST00000493553 CDC25BP30305 580 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 TXLNAP40222 546 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 CLDN10P78369 228 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 TTC38Q5R3I4 469 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 DACT2Q5SW24 774 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 ZNF385CQ66K41 422 aaPredicted RBP11.4□□□□□ -0.58
PRPF3-206ENST00000493553 MSL1Q68DK7 614 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 CDC42EP5Q6NZY7 148 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 SARM1Q6SZW1 724 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 OLFM4Q6UX06 510 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 KRT25Q7Z3Z0 450 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 BLIDQ8IZY5 108 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRPF3-206ENST00000493553 OSBPL5Q9H0X9 879 aaPredicted RBP11.4□□□□□ -0.58
PRPF3-206ENST00000493553 CRISPLD1Q9H336 500 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 GJB4Q9NTQ9 266 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 BARHL2Q9NY43 387 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 PI4KBQ9UBF8 816 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 MAD2L2Q9UI95 211 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 HDAC9Q9UKV0 1011 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 PCDHA4Q9UN74 947 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 BAZ2AQ9UIF9 1905 aaKnown RBP11.4□□□□□ -0.58
PRPF3-206ENST00000493553 MYH15Q9Y2K3 1946 aa11.4□□□□□ -0.58
PRPF3-206ENST00000493553 TNS1Q9HBL0 1735 aaKnown RBP11.4□□□□□ -0.58
PRPF3-206ENST00000493553 NEMFO60524 1076 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 NMT2O60551 498 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 NLRP12P59046 1061 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 EZH2Q15910 746 aaKnown RBP11.39□□□□□ -0.59
PRPF3-206ENST00000493553 FKBP1CQ5VVH2 108 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 APOBEC3HQ6NTF7 200 aaKnown RBP11.39□□□□□ -0.59
PRPF3-206ENST00000493553 POTEAQ6S8J7 498 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 KRBA2Q6ZNG9 492 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 CERS5Q8N5B7 392 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 CNNM3Q8NE01 707 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 CALR3Q96L12 384 aaKnown RBP11.39□□□□□ -0.59
PRPF3-206ENST00000493553 NAP1L4Q99733 375 aaKnown RBP11.39□□□□□ -0.59
PRPF3-206ENST00000493553 CFHR5Q9BXR6 569 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 SCHIP1Q9P0W5 487 aaPredicted RBP11.39□□□□□ -0.59
PRPF3-206ENST00000493553 FBXO2Q9UK22 296 aaPredicted RBP11.39□□□□□ -0.59
PRPF3-206ENST00000493553 ZKSCAN5Q9Y2L8 839 aa11.39□□□□□ -0.59
PRPF3-206ENST00000493553 NAV1Q8NEY1 1877 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 IGKV6D-41A0A0C4DH26 115 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 IKBKBO14920 756 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 PPIP5K2O43314 1243 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 LONP1P36776 959 aaKnown RBP11.38□□□□□ -0.59
PRPF3-206ENST00000493553 TOB1P50616 345 aaPredicted RBP11.38□□□□□ -0.59
PRPF3-206ENST00000493553 TGFB2P61812 414 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 ATP2C1P98194 919 aaPredicted RBP11.38□□□□□ -0.59
PRPF3-206ENST00000493553 UBAP2LQ14157 1087 aaKnown RBP11.38□□□□□ -0.59
PRPF3-206ENST00000493553 SHC4Q6S5L8 630 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 LARGE2Q8N3Y3 721 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 OGFOD1Q8N543 542 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 TNFRSF25Q93038 417 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 RUBCNLQ9H714 662 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 KANSL2Q9H9L4 492 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 DNAAF2Q9NVR5 837 aaKnown RBP11.38□□□□□ -0.59
PRPF3-206ENST00000493553 TUBE1Q9UJT0 475 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 KIAA1024Q9UPX6 916 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 MAFBQ9Y5Q3 323 aaPredicted RBP11.38□□□□□ -0.59
PRPF3-206ENST00000493553 USP3Q9Y6I4 520 aa11.38□□□□□ -0.59
PRPF3-206ENST00000493553 MYL1P05976 194 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 SNHG28P0DPA3 235 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 ATP4AP20648 1035 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 HOXA7P31268 230 aaPredicted RBP11.37□□□□□ -0.59
PRPF3-206ENST00000493553 PRPHP41219 470 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 RBM5P52756 815 aaKnown RBP eCLIP11.37□□□□□ -0.59
PRPF3-206ENST00000493553 EPHA4P54764 986 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 FOXK2Q01167 660 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 PICALMQ13492 652 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 EFHC2Q5JST6 749 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 CMTR1Q8N1G2 835 aaKnown RBP11.37□□□□□ -0.59
PRPF3-206ENST00000493553 IQUBQ8NA54 791 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 MLKLQ8NB16 471 aa11.37□□□□□ -0.59
PRPF3-206ENST00000493553 TPCN2Q8NHX9 752 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms