RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
LSM2-214ENST00000493387 INF2Q27J81 1249 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 NIPA1Q7RTP0 329 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 NLRX1Q86UT6 975 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 SLAIN1Q8ND83 568 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 CRYGNQ8WXF5 182 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 VTA1Q9NP79 307 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.15□□□□□ -0.3
LSM2-214ENST00000493387 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.3
LSM2-214ENST00000493387 ASTN1O14525 1302 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 CYP3A7-CYP3A51PA0A087WV96 503 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 MAFGO15525 162 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 CYP3A7P24462 503 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 LETM2Q2VYF4 491 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 CEP55Q53EZ4 464 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 ATL3Q6DD88 541 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 KCNV1Q6PIU1 500 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 FERMT3Q86UX7 667 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 ABHD16BQ9H3Z7 469 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 PTPN22Q9Y2R2 807 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 UBIAD1Q9Y5Z9 338 aa13.14□□□□□ -0.31
LSM2-214ENST00000493387 CASP8AP2Q9UKL3 1982 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 BMP15O95972 392 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 IGHA2P01877 340 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 HMGCRP04035 888 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 TGFB3P10600 412 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 UBXN2AP68543 259 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 SETQ01105 290 aaPredicted RBP13.13□□□□□ -0.31
LSM2-214ENST00000493387 EARS2Q5JPH6 523 aaKnown RBP13.13□□□□□ -0.31
LSM2-214ENST00000493387 TTC38Q5R3I4 469 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 IL31RAQ8NI17 732 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 GPRASP2Q96D09 838 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
LSM2-214ENST00000493387 INPP4AQ96PE3 977 aaPredicted RBP13.13□□□□□ -0.31
LSM2-214ENST00000493387 MXRA8Q9BRK3 442 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 JADE2Q9NQC1 790 aa13.13□□□□□ -0.31
LSM2-214ENST00000493387 MEIS1O00470 390 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 CCNT1O60563 726 aaKnown RBP13.12□□□□□ -0.31
LSM2-214ENST00000493387 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
LSM2-214ENST00000493387 GRK4P32298 578 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 ICAM3P32942 547 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 MRPS9P82933 396 aaKnown RBP13.12□□□□□ -0.31
LSM2-214ENST00000493387 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 PKP1Q13835 747 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 CCL14Q16627 93 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 Q4G0T1 1027 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
LSM2-214ENST00000493387 FBXO46Q6PJ61 603 aaPredicted RBP13.12□□□□□ -0.31
LSM2-214ENST00000493387 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
LSM2-214ENST00000493387 TRIB2Q92519 343 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 MBOAT7Q96N66 472 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 FLRT1Q9NZU1 646 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 DDX25Q9UHL0 483 aaKnown RBP13.12□□□□□ -0.31
LSM2-214ENST00000493387 CEP131Q9UPN4 1083 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 PTCH2Q9Y6C5 1203 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 PLXNA1Q9UIW2 1896 aa13.12□□□□□ -0.31
LSM2-214ENST00000493387 RBM47A0AV96 593 aaKnown RBP13.11□□□□□ -0.31
LSM2-214ENST00000493387 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 FIBPO43427 364 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 PRR16Q569H4 304 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
LSM2-214ENST00000493387 LCTP09848 1927 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 SPATA31C2B4DYI2 1134 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 FAM86B1E9PN63 330 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 LAD1O00515 517 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 TBX3O15119 743 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 NKRFO15226 690 aaKnown RBP eCLIP13.1□□□□□ -0.31
LSM2-214ENST00000493387 EDIL3O43854 480 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
LSM2-214ENST00000493387 FAM86B2P0C5J1 330 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 ELNP15502 786 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 ITGB5P18084 799 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 CYP2C19P33261 490 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 MCM7P33993 719 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 TOB1P50616 345 aaPredicted RBP13.1□□□□□ -0.31
LSM2-214ENST00000493387 MTMR1Q13613 665 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 ZNF174Q15697 407 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 SEPT14Q6ZU15 432 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 EEPD1Q7L9B9 569 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 FBXO16Q8IX29 292 aaPredicted RBP13.1□□□□□ -0.31
LSM2-214ENST00000493387 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
LSM2-214ENST00000493387 FAM20AQ96MK3 541 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 KATNBL1Q9H079 304 aa13.1□□□□□ -0.31
LSM2-214ENST00000493387 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
LSM2-214ENST00000493387 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
LSM2-214ENST00000493387 CFAP45Q9UL16 551 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms