RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PDIA4P13667 645 aaKnown RBP15.35■□□□□ 0.05
MSH6-208ENST00000493177 MRPL12P52815 198 aaKnown RBP15.35■□□□□ 0.05
MSH6-208ENST00000493177 RTP1P59025 263 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 NUCB2P80303 420 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 BAATQ14032 418 aaPredicted RBP15.35■□□□□ 0.05
MSH6-208ENST00000493177 CCDC144BQ3MJ40 725 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 EEPD1Q7L9B9 569 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 DIS3L2Q8IYB7 885 aaKnown RBP15.35■□□□□ 0.05
MSH6-208ENST00000493177 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
MSH6-208ENST00000493177 BICD2Q8TD16 824 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 ZMYND12Q9H0C1 365 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 PRDM5Q9NQX1 630 aaPredicted RBP15.35■□□□□ 0.05
MSH6-208ENST00000493177 PCDHA4Q9UN74 947 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 MTMR6Q9Y217 621 aa15.35■□□□□ 0.05
MSH6-208ENST00000493177 ESYT2A0FGR8 921 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 SOWAHBA6NEL2 793 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 B4DLN1 442 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 CFBP00751 764 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 PKP1Q13835 747 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 GALNT17Q6IS24 598 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 SLC39A5Q6ZMH5 540 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 FERMT3Q86UX7 667 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 MCF2L2Q86YR7 1114 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 BLIDQ8IZY5 108 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 VTI1AQ96AJ9 217 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 FGD4Q96M96 766 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 GLT8D2Q9H1C3 349 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 RIC8AQ9NPQ8 531 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 CHMP5Q9NZZ3 219 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 CIZ1Q9ULV3 898 aaPredicted RBP15.34■□□□□ 0.05
MSH6-208ENST00000493177 SYNRGQ9UMZ2 1314 aa15.34■□□□□ 0.05
MSH6-208ENST00000493177 GCOM1H8Y6P7 765 aaPredicted RBP15.33■□□□□ 0.04
MSH6-208ENST00000493177 DUSP11O75319 330 aaKnown RBP15.33■□□□□ 0.04
MSH6-208ENST00000493177 POLR2MP0CAP2 368 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 ZSCAN22P10073 491 aaPredicted RBP15.33■□□□□ 0.04
MSH6-208ENST00000493177 DDIT3P35638 169 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 ALDH5A1P51649 535 aaPredicted RBP15.33■□□□□ 0.04
MSH6-208ENST00000493177 TNFAIP2Q03169 654 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 UBE2SQ16763 222 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 SLC30A10Q6XR72 485 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 FBXO16Q8IX29 292 aaPredicted RBP15.33■□□□□ 0.04
MSH6-208ENST00000493177 RGS22Q8NE09 1264 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 LBHD1Q9BQE6 289 aaPredicted RBP15.33■□□□□ 0.04
MSH6-208ENST00000493177 AP5M1Q9H0R1 490 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 STARD7Q9NQZ5 370 aa15.33■□□□□ 0.04
MSH6-208ENST00000493177 BTBD18B2RXH4 712 aa15.32■□□□□ 0.04
MSH6-208ENST00000493177 PDE4DQ08499 809 aa15.32■□□□□ 0.04
MSH6-208ENST00000493177 JAKMIP3Q5VZ66 844 aa15.32■□□□□ 0.04
MSH6-208ENST00000493177 USP17L6PQ6QN14 398 aa15.32■□□□□ 0.04
MSH6-208ENST00000493177 REXO1Q8N1G1 1221 aaKnown RBP15.32■□□□□ 0.04
MSH6-208ENST00000493177 PCSK9Q8NBP7 692 aaKnown RBP15.32■□□□□ 0.04
MSH6-208ENST00000493177 DAGLBQ8NCG7 672 aa15.32■□□□□ 0.04
MSH6-208ENST00000493177 RASGRP4Q8TDF6 673 aa15.32■□□□□ 0.04
MSH6-208ENST00000493177 OXER1Q8TDS5 423 aa15.32■□□□□ 0.04
MSH6-208ENST00000493177 PURBQ96QR8 312 aaKnown RBP15.32■□□□□ 0.04
MSH6-208ENST00000493177 PHF24Q9UPV7 400 aa15.32■□□□□ 0.04
MSH6-208ENST00000493177 MKI67P46013 3256 aaKnown RBP15.32■□□□□ 0.04
MSH6-208ENST00000493177 CCDC194A0A1B0GVG4 234 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 A0A1W2PQ45 241 aaPredicted RBP15.31■□□□□ 0.04
MSH6-208ENST00000493177 A0A1W2PQY0 241 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 MOXD2PA6NHM9 499 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 KIF28PB7ZC32 967 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 OPLAHO14841 1288 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 ADAMTS3O15072 1205 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 ADAMTS4O75173 837 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 BRD1O95696 1058 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 F13A1P00488 732 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 HOXA13P31271 388 aaPredicted RBP15.31■□□□□ 0.04
MSH6-208ENST00000493177 RPS6P62753 249 aaKnown RBP15.31■□□□□ 0.04
MSH6-208ENST00000493177 MDM2Q00987 491 aaPredicted RBP15.31■□□□□ 0.04
MSH6-208ENST00000493177 NR5A1Q13285 461 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 TRIM60Q495X7 471 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 GNASQ5JWF2 1037 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 FCHSD1Q86WN1 690 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 TBC1D5Q92609 795 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 GLT1D1Q96MS3 346 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 TSEN34Q9BSV6 310 aaKnown RBP15.31■□□□□ 0.04
MSH6-208ENST00000493177 UBE2OQ9C0C9 1292 aaKnown RBP15.31■□□□□ 0.04
MSH6-208ENST00000493177 FOXP1Q9H334 677 aaPredicted RBP15.31■□□□□ 0.04
MSH6-208ENST00000493177 VTA1Q9NP79 307 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 TMEM260Q9NX78 707 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 PCDHA6Q9UN73 950 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 PCDHA8Q9Y5H6 950 aa15.31■□□□□ 0.04
MSH6-208ENST00000493177 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.3■□□□□ 0.04
MSH6-208ENST00000493177 SPDYE3A6NKU9 549 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 ZEB2O60315 1214 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 MAGEA10P43363 369 aaPredicted RBP15.3■□□□□ 0.04
MSH6-208ENST00000493177 ACLYP53396 1101 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 NPY5RQ15761 445 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 KCNA10Q16322 511 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 PIK3AP1Q6ZUJ8 805 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 KRT25Q7Z3Z0 450 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 TLK2Q86UE8 772 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 PGBD1Q96JS3 809 aa15.3■□□□□ 0.04
MSH6-208ENST00000493177 DDX49Q9Y6V7 483 aaKnown RBP15.3■□□□□ 0.04
MSH6-208ENST00000493177 ASTN1O14525 1302 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 LOC102724159A0A0B4J2E5 919 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 MYADML2A6NDP7 307 aa15.29■□□□□ 0.04
MSH6-208ENST00000493177 MEIS2O14770 477 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms