RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 SCFD2Q8WU76 684 aa17.45■□□□□ 0.38
SS18L1-204ENST00000491916 CUL5Q93034 780 aa17.45■□□□□ 0.38
SS18L1-204ENST00000491916 GTF3C6Q969F1 213 aa17.45■□□□□ 0.38
SS18L1-204ENST00000491916 TSEN34Q9BSV6 310 aaKnown RBP17.45■□□□□ 0.38
SS18L1-204ENST00000491916 RANBP2P49792 3224 aaKnown RBP17.45■□□□□ 0.38
SS18L1-204ENST00000491916 DYNC1LI2O43237 492 aaPredicted RBP17.44■□□□□ 0.38
SS18L1-204ENST00000491916 MYCLP12524 364 aaPredicted RBP17.44■□□□□ 0.38
SS18L1-204ENST00000491916 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
SS18L1-204ENST00000491916 ADCY7P51828 1080 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 BEX3Q00994 111 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 SSRP1Q08945 709 aaKnown RBP17.44■□□□□ 0.38
SS18L1-204ENST00000491916 NPY5RQ15761 445 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 LY6KQ17RY6 165 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 LRRC26Q2I0M4 334 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 SEPT14Q6ZU15 432 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 RNF180Q86T96 592 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 INPP4AQ96PE3 977 aaPredicted RBP17.44■□□□□ 0.38
SS18L1-204ENST00000491916 MPHOSPH6Q99547 160 aaKnown RBP17.44■□□□□ 0.38
SS18L1-204ENST00000491916 SENP6Q9GZR1 1112 aaPredicted RBP17.44■□□□□ 0.38
SS18L1-204ENST00000491916 TMEM260Q9NX78 707 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 VPS54Q9P1Q0 977 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 DDX41Q9UJV9 622 aaKnown RBP17.44■□□□□ 0.38
SS18L1-204ENST00000491916 PCDHA6Q9UN73 950 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 PCDHA8Q9Y5H6 950 aa17.44■□□□□ 0.38
SS18L1-204ENST00000491916 CPLX1O14810 134 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 EDIL3O43854 480 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 C6orf222P0C671 652 aaPredicted RBP17.43■□□□□ 0.38
SS18L1-204ENST00000491916 TXNP10599 105 aaKnown RBP17.43■□□□□ 0.38
SS18L1-204ENST00000491916 CCND2P30279 289 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 ACLYP53396 1101 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 SP2Q02086 613 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 PCNX4Q63HM2 1172 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 CRYGNQ8WXF5 182 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 PGBD1Q96JS3 809 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 LIMCH1Q9UPQ0 1083 aa17.43■□□□□ 0.38
SS18L1-204ENST00000491916 A0A1W2PQ45 241 aaPredicted RBP17.42■□□□□ 0.38
SS18L1-204ENST00000491916 A0A1W2PQY0 241 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 KBTBD13C9JR72 458 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
SS18L1-204ENST00000491916 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
SS18L1-204ENST00000491916 DEXIO95424 95 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
SS18L1-204ENST00000491916 ARHGAP1Q07960 439 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 TTLL4Q14679 1199 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 SNX17Q15036 470 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 RABEP1Q15276 862 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 GNASQ5JWF2 1037 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 NSUN7Q8NE18 718 aaKnown RBP17.42■□□□□ 0.38
SS18L1-204ENST00000491916 FERMT2Q96AC1 680 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 BCAS3Q9H6U6 928 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 SH3GLB2Q9NR46 395 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 STK36Q9NRP7 1315 aa17.42■□□□□ 0.38
SS18L1-204ENST00000491916 MOXD2PA6NHM9 499 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 M0R2N6 131 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 ASGR1P07306 291 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 ITGB5P18084 799 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 ICAM3P32942 547 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 AKAP17AQ02040 695 aaKnown RBP17.41■□□□□ 0.38
SS18L1-204ENST00000491916 FSCN1Q16658 493 aaKnown RBP17.41■□□□□ 0.38
SS18L1-204ENST00000491916 XRRA1Q6P2D8 792 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 SLC39A5Q6ZMH5 540 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 TRIM22Q8IYM9 498 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 RTEL1Q9NZ71 1219 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 UBIAD1Q9Y5Z9 338 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 MYH7BA7E2Y1 1941 aa17.41■□□□□ 0.38
SS18L1-204ENST00000491916 A6NJR5 290 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 SPATA31C2B4DYI2 1134 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 JAK2O60674 1132 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 STAM2O75886 525 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 ATN1P54259 1190 aaPredicted RBP17.4■□□□□ 0.38
SS18L1-204ENST00000491916 C1orf53Q5VUE5 145 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
SS18L1-204ENST00000491916 OR6J1Q8NGC5 347 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 RASGRP4Q8TDF6 673 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 EMID1Q96A84 441 aaPredicted RBP17.4■□□□□ 0.38
SS18L1-204ENST00000491916 HTATIP2Q9BUP3 242 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 ANO3Q9BYT9 981 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 AP5M1Q9H0R1 490 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 GLT8D2Q9H1C3 349 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 GJB4Q9NTQ9 266 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
SS18L1-204ENST00000491916 SPDYE3A6NKU9 549 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 CDKL5O76039 1030 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 FOSP01100 380 aaPredicted RBP17.39■□□□□ 0.37
SS18L1-204ENST00000491916 TGFB3P10600 412 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 UBA1P22314 1058 aaKnown RBP17.39■□□□□ 0.37
SS18L1-204ENST00000491916 SREBF1P36956 1147 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 AP3B2Q13367 1082 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 JAKMIP3Q5VZ66 844 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 PCSK9Q8NBP7 692 aaKnown RBP17.39■□□□□ 0.37
SS18L1-204ENST00000491916 CYP2W1Q8TAV3 490 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 CCDC12Q8WUD4 166 aaPredicted RBP17.39■□□□□ 0.37
SS18L1-204ENST00000491916 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.37
SS18L1-204ENST00000491916 SPC25Q9HBM1 224 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 TELO2Q9Y4R8 837 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
SS18L1-204ENST00000491916 DOCK5Q9H7D0 1870 aa17.38■□□□□ 0.37
SS18L1-204ENST00000491916 CDK7P50613 346 aa17.38■□□□□ 0.37
SS18L1-204ENST00000491916 CELF3Q5SZQ8 465 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms