RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 DDX41Q9UJV9 622 aaKnown RBP21.33■■□□□ 1.01
SMIM4-205ENST00000491607 RBM8AQ9Y5S9 174 aaKnown RBP21.33■■□□□ 1.01
SMIM4-205ENST00000491607 SLC4A7Q9Y6M7 1214 aa21.33■■□□□ 1.01
SMIM4-205ENST00000491607 MYH6P13533 1939 aa21.33■■□□□ 1
SMIM4-205ENST00000491607 PFKMP08237 780 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 CASTP20810 708 aaKnown RBP21.32■■□□□ 1
SMIM4-205ENST00000491607 GHRHRQ02643 423 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 TROAPQ12815 778 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 PTGISQ16647 500 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 SLC35G1Q2M3R5 365 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 PIBF1Q8WXW3 757 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 PDCD2LQ9BRP1 358 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 NKX2-4Q9H2Z4 354 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 RIOX1Q9H6W3 641 aa21.32■■□□□ 1
SMIM4-205ENST00000491607 GCOM1H8Y6P7 765 aaPredicted RBP21.31■■□□□ 1
SMIM4-205ENST00000491607 CYTH3O43739 400 aa21.31■■□□□ 1
SMIM4-205ENST00000491607 POLR2MP0CAP2 368 aa21.31■■□□□ 1
SMIM4-205ENST00000491607 ANTXR2P58335 489 aa21.31■■□□□ 1
SMIM4-205ENST00000491607 DGKDQ16760 1214 aa21.31■■□□□ 1
SMIM4-205ENST00000491607 GAS2L1Q99501 681 aaPredicted RBP21.31■■□□□ 1
SMIM4-205ENST00000491607 SCN10AQ9Y5Y9 1956 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 PNMA6FA0A0J9YX94 578 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 PITPNM1O00562 1244 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 SORBS3O60504 671 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 RFC2P35250 354 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 RABGGTBP53611 331 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 BFSP2Q13515 415 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 LAMC2Q13753 1193 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 PGM5Q15124 567 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 FCHSD1Q86WN1 690 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 DHX37Q8IY37 1157 aaKnown RBP21.3■■□□□ 1
SMIM4-205ENST00000491607 MB21D2Q8IYB1 491 aaPredicted RBP21.3■■□□□ 1
SMIM4-205ENST00000491607 EMID1Q96A84 441 aaPredicted RBP21.3■■□□□ 1
SMIM4-205ENST00000491607 VWCEQ96DN2 955 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 PRDM12Q9H4Q4 367 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 SLC28A3Q9HAS3 691 aa21.3■■□□□ 1
SMIM4-205ENST00000491607 YBX2Q9Y2T7 364 aaKnown RBP21.3■■□□□ 1
SMIM4-205ENST00000491607 IQCF3P0C7M6 154 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 ACTN1P12814 892 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 ATP2A2P16615 1042 aaKnown RBP21.29■■□□□ 1
SMIM4-205ENST00000491607 GDF6Q6KF10 455 aaPredicted RBP21.29■■□□□ 1
SMIM4-205ENST00000491607 CASC1Q6TDU7 716 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 SAMD3Q8N6K7 520 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 CCDC155Q8N6L0 562 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 IL31RAQ8NI17 732 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 IGDCC4Q8TDY8 1250 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 KAT2BQ92831 832 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 ZFP91Q96JP5 570 aaPredicted RBP21.29■■□□□ 1
SMIM4-205ENST00000491607 ALG1Q9BT22 464 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 COL25A1Q9BXS0 654 aaPredicted RBP21.29■■□□□ 1
SMIM4-205ENST00000491607 FTOQ9C0B1 505 aaKnown RBP eCLIP21.29■■□□□ 1
SMIM4-205ENST00000491607 A0A0C4DFX4 3053 aa21.29■■□□□ 1
SMIM4-205ENST00000491607 RGS20O76081 388 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 ZNF286BP0CG31 522 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 CCND2P30279 289 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 KCNV1Q6PIU1 500 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 VSIG10LQ86VR7 867 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 C7orf31Q8N865 590 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 PPTC7Q8NI37 304 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 CTCFLQ8NI51 663 aaPredicted RBP21.28■■□□□ 1
SMIM4-205ENST00000491607 MYL10Q9BUA6 226 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 KATNAL1Q9BW62 490 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 LY9Q9HBG7 655 aa21.28■■□□□ 1
SMIM4-205ENST00000491607 KIAA1217Q5T5P2 1943 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 PRC1O43663 620 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 PSEN2P49810 448 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 PPP2R2DQ66LE6 453 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 NFXL1Q6ZNB6 911 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 SESTD1Q86VW0 696 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 ZNF654Q8IZM8 581 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 PPM1EQ8WY54 764 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 SPATA33Q96N06 139 aa21.27■■□□□ 1
SMIM4-205ENST00000491607 DDAH1O94760 285 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 GGPS1O95749 300 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 MYOGP15173 224 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 KIF5BP33176 963 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 MFSD10Q14728 455 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 MYSM1Q5VVJ2 828 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 CAGE1Q8TC20 777 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 LSG1Q9H089 658 aaKnown RBP21.26■□□□□ 0.99
SMIM4-205ENST00000491607 HDAC6Q9UBN7 1215 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 GTF2IRD1Q9UHL9 959 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 PCDHA11Q9Y5I1 949 aa21.26■□□□□ 0.99
SMIM4-205ENST00000491607 CCDC69A6NI79 296 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 F2P00734 622 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 MCM5P33992 734 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 KIAA0753Q2KHM9 967 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 HSDL1Q3SXM5 330 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 CELF3Q5SZQ8 465 aaKnown RBP21.25■□□□□ 0.99
SMIM4-205ENST00000491607 USP38Q8NB14 1042 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 AFAP1L1Q8TED9 768 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 RRP36Q96EU6 259 aaKnown RBP21.25■□□□□ 0.99
SMIM4-205ENST00000491607 ESYT1Q9BSJ8 1104 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 MLXIPQ9HAP2 919 aa21.25■□□□□ 0.99
SMIM4-205ENST00000491607 SEC63Q9UGP8 760 aaKnown RBP21.25■□□□□ 0.99
SMIM4-205ENST00000491607 TANC1Q9C0D5 1861 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 SLC27A2O14975 620 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 TGFB3P10600 412 aa21.24■□□□□ 0.99
SMIM4-205ENST00000491607 UBA1P22314 1058 aaKnown RBP21.24■□□□□ 0.99
SMIM4-205ENST00000491607 IGFBP4P22692 258 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms