RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 NTMQ9P121 344 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 STRIP2Q9ULQ0 834 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 ZDHHC9Q9Y397 364 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 CCDC9Q9Y3X0 531 aaKnown RBP2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 PCDHA2Q9Y5H9 948 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 ARID4BQ4LE39 1312 aaPredicted RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 A0A0G2JLL6 359 aaPredicted RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 IRS4O14654 1257 aaPredicted RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 U2SURPO15042 1029 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 MEFVO15553 781 aaPredicted RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 PPP1R11O60927 126 aaPredicted RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 THBDP07204 575 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 HOXC12P31275 282 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 DNAJA1P31689 397 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 CNR2P34972 360 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 RBM25P49756 843 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 NKX3-2P78367 333 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 RBM10P98175 930 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 CACNB2Q08289 660 aaPredicted RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 GRB10Q13322 594 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 TNNI3KQ59H18 835 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 WWC2Q6AWC2 1192 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 GTF2IRD2BQ6EKJ0 949 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 C6orf15Q6UXA7 325 aaPredicted RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 ETV3LQ6ZN32 361 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 DBX2Q6ZNG2 339 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 GTF2IRD2Q86UP8 949 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 DCP2Q8IU60 420 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 FAM178BQ8IXR5 827 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 FNIP1Q8TF40 1166 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 SHDQ96IW2 340 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 LOXL4Q96JB6 756 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 IPO9Q96P70 1041 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 MPHOSPH9Q99550 1183 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 MCMBPQ9BTE3 642 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 HIRIP3Q9BW71 556 aaPredicted RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 RNF38Q9H0F5 515 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 XYLT2Q9H1B5 865 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 LUC7LQ9NQ29 371 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 CYP26B1Q9NR63 512 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 CLDND1Q9NY35 253 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 APEX2Q9UBZ4 518 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 RAPGEFL1Q9UHV5 662 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 CROTQ9UKG9 612 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 EMC9Q9Y3B6 208 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 HMGXB3Q12766 1538 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 TONSLQ96HA7 1378 aa2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 AQRO60306 1485 aaKnown RBP eCLIP2.71□□□□□ -1.98
SNRNP40-207ENST00000491106 CUX1P39880 1505 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 K7ESM1 405 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 DDX3XO00571 662 aaKnown RBP eCLIP2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 FFAR3O14843 346 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 SRGAP3O43295 1099 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 DGKIO75912 1065 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 ITGAVP06756 1048 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 GLI4P10075 376 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 INSRRP14616 1297 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 BCL6P41182 706 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 STAT5AP42229 794 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 GTF2A2P52657 109 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 CASP7P55210 303 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 ARID5AQ03989 594 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 RTP5Q14D33 572 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 CHRNA2Q15822 529 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 BORAQ6PGQ7 559 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 GLB1LQ6UWU2 654 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 FRMD5Q7Z6J6 570 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 B3GNT8Q7Z7M8 397 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 METTL16Q86W50 562 aaKnown RBP2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 CARFQ8N187 725 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 FAM169BQ8N8A8 192 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 C19orf47Q8N9M1 422 aaKnown RBP2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 NETO2Q8NC67 525 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 RASGRP4Q8TDF6 673 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 BTN2A2Q8WVV5 523 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 KLHL6Q8WZ60 621 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 CCDC140Q96MF4 163 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 KCNJ15Q99712 375 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 TRIM55Q9BYV6 548 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 PRKRIP1Q9H875 184 aaPredicted RBP2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 L2HGDHQ9H9P8 463 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 PCDH18Q9HCL0 1135 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 WDR97A6NE52 1622 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 PRDM2Q13029 1718 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 TIAM1Q13009 1591 aa2.7□□□□□ -1.98
SNRNP40-207ENST00000491106 IRS2Q9Y4H2 1338 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 FMN1Q68DA7 1419 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 CASKIN1Q8WXD9 1431 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 UACAQ9BZF9 1416 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 CCDC85CA6NKD9 419 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 HGSO14964 777 aaPredicted RBP2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 MAFKO60675 156 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 CPP00450 1065 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 HSPA5P11021 654 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 ATF4P18848 351 aaPredicted RBP2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 VAMP1P23763 118 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 FPR2P25090 351 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 ETFBP38117 255 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 ZNF143P52747 638 aaPredicted RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms