RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ALAS1P13196 640 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 CACNB3P54284 484 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
NPHP3-208ENST00000490993 GNPTABQ3T906 1256 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ARHGEF16Q5VV41 709 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ARMCX5Q6P1M9 558 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 HDXQ7Z353 690 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 GUF1Q8N442 669 aaKnown RBP8.11□□□□□ -1.11
NPHP3-208ENST00000490993 CEP63Q96MT8 703 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 TAOK3Q9H2K8 898 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 LARSQ9P2J5 1176 aaKnown RBP8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ZNF215Q9UL58 517 aaPredicted RBP8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ZBTB21Q9ULJ3 1066 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ARHGAP4P98171 946 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ARID5BQ14865 1188 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 NSMFQ6X4W1 530 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 IL17RBQ9NRM6 502 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 PKD2L1Q9P0L9 805 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 BACH1O14867 736 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 EXOC3O60645 756 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 FDX1P10109 184 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 BCRP11274 1271 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 CCZ1BP86790 482 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 CCZ1P86791 482 aaPredicted RBP8.11□□□□□ -1.11
NPHP3-208ENST00000490993 RAD51AP2Q09MP3 1159 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ALCAMQ13740 583 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 BRD3Q15059 726 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 CLUL1Q15846 466 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ADSSL1Q8N142 457 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 DDX12PQ92771 950 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 MXD3Q9BW11 206 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 RIOX1Q9H6W3 641 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 JMJD4Q9H9V9 463 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 EMILIN3Q9NT22 766 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 BCS1LQ9Y276 419 aa8.11□□□□□ -1.11
NPHP3-208ENST00000490993 ABCD1P33897 745 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 TNNC1P63316 161 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 NR1I3Q14994 352 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 FAM178BQ8IXR5 827 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 NEK9Q8TD19 979 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 SLC16A10Q8TF71 515 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 SAR1BQ9Y6B6 198 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 STRCP1A6NGW2 1772 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 UBE2Q2LH0YL09 131 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 DDR1Q08345 913 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 SLC15A2Q16348 729 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 RSBN1LQ6PCB5 846 aaPredicted RBP8.1□□□□□ -1.11
NPHP3-208ENST00000490993 KIFAP3Q92845 792 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 DRC1Q96MC2 740 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 TRIM9Q9C026 710 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 NDST4Q9H3R1 872 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 ROBO3Q96MS0 1386 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 CASP1P29466 404 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 FMR1Q06787 632 aaKnown RBP eCLIP8.1□□□□□ -1.11
NPHP3-208ENST00000490993 PABPC4Q13310 644 aaKnown RBP eCLIP8.1□□□□□ -1.11
NPHP3-208ENST00000490993 SYCE1Q8N0S2 351 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 FAM151AQ8WW52 585 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 CDC23Q9UJX2 597 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 ZNRF3Q9ULT6 936 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 DOT1LQ8TEK3 1739 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 DDX39AO00148 427 aaKnown RBP8.1□□□□□ -1.11
NPHP3-208ENST00000490993 TNFAIP3P21580 790 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 FAM193AP78312 1265 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 GRIN1Q05586 938 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 WDR78Q5VTH9 848 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 USP49Q70CQ1 688 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 ABHD10Q9NUJ1 306 aa8.1□□□□□ -1.11
NPHP3-208ENST00000490993 POTEMA6NI47 508 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 TDP2O95551 362 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 CHRNA5P30532 468 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 SARSP49591 514 aaKnown RBP8.09□□□□□ -1.11
NPHP3-208ENST00000490993 MOXD1Q6UVY6 613 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 GIMAP8Q8ND71 665 aaPredicted RBP8.09□□□□□ -1.11
NPHP3-208ENST00000490993 RABGGTAQ92696 567 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 CAPZA3Q96KX2 299 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 IMPG2Q9BZV3 1241 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 VPS33BQ9H267 617 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 GINM1Q9NU53 330 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 SOWAHDA6NJG2 315 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 CCDC169A6NNP5 214 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 NR2F2P24468 414 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 DNA2P51530 1060 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 SUPT20HL1Q3ZLR7 823 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 USP17L6PQ6QN14 398 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 TRMT1LQ7Z2T5 733 aaKnown RBP8.09□□□□□ -1.11
NPHP3-208ENST00000490993 CDHR1Q96JP9 859 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 NAP1L3Q99457 506 aaPredicted RBP8.09□□□□□ -1.11
NPHP3-208ENST00000490993 HOMER2Q9NSB8 354 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms