RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 CAVIN3Q969G5 261 aa12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 CUEDC2Q9H467 287 aa12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 MAGEF1Q9HAY2 307 aa12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 CTTNBP2NLQ9P2B4 639 aa12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 ADAMTS1Q9UHI8 967 aa12.33□□□□□ -0.43
CRNKL1-204ENST00000490910 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 LRRC53A6NM62 1247 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 SCG2P13521 617 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 ITIH3Q06033 890 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 ANKRD20A8PQ5CZ79 823 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 ANKRD20A3Q5VUR7 823 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 TRPM8Q7Z2W7 1104 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 TBC1D10CQ8IV04 446 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 AGXT2Q9BYV1 514 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 DDX47Q9H0S4 455 aaKnown RBP12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 A0A0G2JLW4 131 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 EPB41P11171 864 aaKnown RBP12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 RAD23BP54727 409 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 CUL3Q13618 768 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 AGBL2Q5U5Z8 902 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 PI16Q6UXB8 463 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 GSTA5Q7RTV2 222 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 MYOCDQ8IZQ8 938 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 FBXO41Q8TF61 875 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 STAMBPL1Q96FJ0 436 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 ETNK1Q9HBU6 452 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 USH1CQ9Y6N9 552 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 MYO3AQ8NEV4 1616 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 USP6P35125 1406 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 SHOX2O60902 331 aaPredicted RBP12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 ATP6V1G2O95670 118 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 GNA14O95837 355 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 KRT15P19012 456 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 ADD2P35612 726 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 CDKAL1Q5VV42 579 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 EHD2Q9NZN4 543 aa12.33□□□□□ -0.44
CRNKL1-204ENST00000490910 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 PPP1R3GB7ZBB8 358 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 OPHN1O60890 802 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 ABCB4P21439 1286 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 DISC1Q9NRI5 854 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 DDX20Q9UHI6 824 aaKnown RBP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 DUSP10Q9Y6W6 482 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 ZC3H13Q5T200 1668 aaKnown RBP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 CIAO1O76071 339 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 TROVE2P10155 538 aaKnown RBP eCLIP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 MYBL2P10244 700 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 ITGA6P23229 1130 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 NONOQ15233 471 aaKnown RBP eCLIP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 INF2Q27J81 1249 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 HDAC7Q8WUI4 952 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 PACSIN2Q9UNF0 486 aaPredicted RBP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 SRGNP10124 158 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 HERVK_113P62684 666 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 IL9RQ01113 521 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 HERC4Q5GLZ8 1057 aaPredicted RBP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 ARHGEF18Q6ZSZ5 1173 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 SNX29Q8TEQ0 813 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 TBC1D7Q9P0N9 293 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 GGT7Q9UJ14 662 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 SERPINA10Q9UK55 444 aa12.32□□□□□ -0.44
CRNKL1-204ENST00000490910 VWDEQ8N2E2 1590 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 CAMSAP1Q5T5Y3 1602 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 TSPY3P0CV98 308 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 TSPY8P0CW00 308 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 ZNF76P36508 570 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 BYSLQ13895 437 aaKnown RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 TTMPQ5BVD1 217 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 HAUS3Q68CZ6 603 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 TEX9Q8N6V9 391 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 RAPGEF5Q92565 580 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 ZSCAN10Q96SZ4 725 aaPredicted RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 MAP3K14Q99558 947 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 CARD10Q9BWT7 1032 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 LY9Q9HBG7 655 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 STOML1Q9UBI4 398 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 TXNDC9O14530 226 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 DAPK3O43293 454 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 PRLRP16471 622 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 MRPS35P82673 323 aaKnown RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 KLC1Q07866 573 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 TSEN2Q8NCE0 465 aaKnown RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 FGD4Q96M96 766 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 ETAA1Q9NY74 926 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 HDAC9Q9UKV0 1011 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 BZW2Q9Y6E2 419 aaKnown RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 SALL1Q9NSC2 1324 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 CPDO75976 1380 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 ANTXR2P58335 489 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms