RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 CDX2Q99626 313 aaPredicted RBP17.78■□□□□ 0.44
IMP4-216ENST00000490895 KIAA1217Q5T5P2 1943 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 SH2B2O14492 632 aaPredicted RBP17.77■□□□□ 0.44
IMP4-216ENST00000490895 RGS20O76081 388 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 MMP3P08254 477 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 DNAJB2P25686 324 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 MCM5P33992 734 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 PTPN11Q06124 597 aaPredicted RBP17.77■□□□□ 0.44
IMP4-216ENST00000490895 FAM47CQ5HY64 1035 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 CASC1Q6TDU7 716 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 TMTC2Q8N394 836 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 IL31RAQ8NI17 732 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 EMID1Q96A84 441 aaPredicted RBP17.77■□□□□ 0.44
IMP4-216ENST00000490895 VWCEQ96DN2 955 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 TMEM87BQ96K49 555 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 SPZ1Q9BXG8 430 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 MRVI1Q9Y6F6 885 aa17.77■□□□□ 0.44
IMP4-216ENST00000490895 FGBP02675 491 aa17.76■□□□□ 0.43
IMP4-216ENST00000490895 MYCLP12524 364 aaPredicted RBP17.76■□□□□ 0.43
IMP4-216ENST00000490895 SMARCA1P28370 1054 aa17.76■□□□□ 0.43
IMP4-216ENST00000490895 KIF5BP33176 963 aa17.76■□□□□ 0.43
IMP4-216ENST00000490895 PGM5Q15124 567 aa17.76■□□□□ 0.43
IMP4-216ENST00000490895 CTCFLQ8NI51 663 aaPredicted RBP17.76■□□□□ 0.43
IMP4-216ENST00000490895 PPP1R13LQ8WUF5 828 aa17.76■□□□□ 0.43
IMP4-216ENST00000490895 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
IMP4-216ENST00000490895 ANO2Q9NQ90 1003 aa17.76■□□□□ 0.43
IMP4-216ENST00000490895 LIFRP42702 1097 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 LAMC2Q13753 1193 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 DGKDQ16760 1214 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 KCNV1Q6PIU1 500 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 RPUSD2Q8IZ73 545 aaKnown RBP17.75■□□□□ 0.43
IMP4-216ENST00000490895 PIBF1Q8WXW3 757 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 KAT2BQ92831 832 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 SCLYQ96I15 445 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 LZTS2Q9BRK4 669 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 CXXC1Q9P0U4 656 aaPredicted RBP17.75■□□□□ 0.43
IMP4-216ENST00000490895 CDH23Q9H251 3354 aa17.75■□□□□ 0.43
IMP4-216ENST00000490895 GRXCR1A8MXD5 290 aa17.74■□□□□ 0.43
IMP4-216ENST00000490895 HOXD8P13378 290 aaPredicted RBP17.74■□□□□ 0.43
IMP4-216ENST00000490895 CASTP20810 708 aaKnown RBP17.74■□□□□ 0.43
IMP4-216ENST00000490895 CCND2P30279 289 aa17.74■□□□□ 0.43
IMP4-216ENST00000490895 GNAQP50148 359 aa17.74■□□□□ 0.43
IMP4-216ENST00000490895 NFXL1Q6ZNB6 911 aa17.74■□□□□ 0.43
IMP4-216ENST00000490895 SESTD1Q86VW0 696 aa17.74■□□□□ 0.43
IMP4-216ENST00000490895 PPTC7Q8NI37 304 aa17.74■□□□□ 0.43
IMP4-216ENST00000490895 RRP36Q96EU6 259 aaKnown RBP17.74■□□□□ 0.43
IMP4-216ENST00000490895 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
IMP4-216ENST00000490895 FRMPD4Q14CM0 1322 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 CCDC69A6NI79 296 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 PLEKHA8P1O95397 391 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 TGFB3P10600 412 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 PBX2P40425 430 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 CELF3Q5SZQ8 465 aaKnown RBP17.73■□□□□ 0.43
IMP4-216ENST00000490895 MYSM1Q5VVJ2 828 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 OTOP2Q7RTS6 562 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 DHX37Q8IY37 1157 aaKnown RBP17.73■□□□□ 0.43
IMP4-216ENST00000490895 SRBD1Q8N5C6 995 aaKnown RBP17.73■□□□□ 0.43
IMP4-216ENST00000490895 MYLIPQ8WY64 445 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 TIFAQ96CG3 184 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 CTAGE1Q96RT6 745 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 PBX4Q9BYU1 374 aa17.73■□□□□ 0.43
IMP4-216ENST00000490895 F2P00734 622 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 PFKMP08237 780 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 CALM1P0DP23 149 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 CALM2P0DP24 149 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 CALM3P0DP25 149 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 CHMP4BP1P59074 171 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 SP2Q02086 613 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 PTGISQ16647 500 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 SGMS1Q86VZ5 419 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 EYSQ5T1H1 3165 aa17.72■□□□□ 0.43
IMP4-216ENST00000490895 HAS3O00219 553 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 PIK3CDO00329 1044 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 PPFIA4O75335 1185 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 GGPS1O95749 300 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 RXRAP19793 462 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 UBA1P22314 1058 aaKnown RBP17.71■□□□□ 0.43
IMP4-216ENST00000490895 RFC2P35250 354 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
IMP4-216ENST00000490895 BFSP2Q13515 415 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 GRIN2CQ14957 1233 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 RNF20Q5VTR2 975 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 GDF6Q6KF10 455 aaPredicted RBP17.71■□□□□ 0.43
IMP4-216ENST00000490895 RETREG2Q8NC44 543 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
IMP4-216ENST00000490895 SPATA33Q96N06 139 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 LRRC2Q9BYS8 371 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 ZNF576Q9H609 170 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 SEC63Q9UGP8 760 aaKnown RBP17.71■□□□□ 0.43
IMP4-216ENST00000490895 NOD1Q9Y239 953 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 SLC12A7Q9Y666 1083 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 CHD9Q3L8U1 2897 aa17.71■□□□□ 0.43
IMP4-216ENST00000490895 UNC80Q8N2C7 3258 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 MEIS2O14770 477 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 STAM2O75886 525 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 IQCF3P0C7M6 154 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 ZNF286BP0CG31 522 aa17.7■□□□□ 0.42
IMP4-216ENST00000490895 PSEN2P49810 448 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms