RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 CFBP00751 764 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 CA3P07451 260 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 RFC2P35250 354 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 GPNMBQ14956 572 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 SLC35G1Q2M3R5 365 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 IFIT1BQ5T764 474 aaKnown RBP19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 ARHGEF16Q5VV41 709 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 DHX38Q92620 1227 aaKnown RBP19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 MTMR8Q96EF0 704 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 IWS1Q96ST2 819 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 UBAC1Q9BSL1 405 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 CNNM2Q9H8M5 875 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 PXMP2Q9NR77 195 aa19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 DDX41Q9UJV9 622 aaKnown RBP19.37■□□□□ 0.69
SRGAP3-209ENST00000490889 TRIP12Q14669 1992 aaPredicted RBP19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 RFXAPO00287 272 aa19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 HSD17B4P51659 736 aa19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 PTGISQ16647 500 aa19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 SESTD1Q86VW0 696 aa19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 RETREG2Q8NC44 543 aa19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 THEGQ9P2T0 379 aa19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 MAD2L2Q9UI95 211 aa19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 NOD1Q9Y239 953 aa19.36■□□□□ 0.69
SRGAP3-209ENST00000490889 KLRF2D3W0D1 207 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 EIF3JO75822 258 aaKnown RBP19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 RGS20O76081 388 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 NR3C2P08235 984 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 ACTN1P12814 892 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 GHRHRQ02643 423 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 BFSP2Q13515 415 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 TMEM67Q5HYA8 995 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 ATXN2LQ8WWM7 1075 aaKnown RBP19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 SLC9A7Q96T83 725 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 AMNQ9BXJ7 453 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 CERS4Q9HA82 394 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 SENP2Q9HC62 589 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 TAF6LQ9Y6J9 622 aa19.35■□□□□ 0.69
SRGAP3-209ENST00000490889 PALM3A6NDB9 673 aaPredicted RBP19.34■□□□□ 0.69
SRGAP3-209ENST00000490889 EPOPA6NHQ4 379 aa19.34■□□□□ 0.69
SRGAP3-209ENST00000490889 TTC22Q5TAA0 569 aa19.34■□□□□ 0.69
SRGAP3-209ENST00000490889 EMID1Q96A84 441 aaPredicted RBP19.34■□□□□ 0.69
SRGAP3-209ENST00000490889 ASB2Q96Q27 587 aa19.34■□□□□ 0.69
SRGAP3-209ENST00000490889 FTOQ9C0B1 505 aaKnown RBP eCLIP19.34■□□□□ 0.69
SRGAP3-209ENST00000490889 MRVI1Q9Y6F6 885 aa19.34■□□□□ 0.69
SRGAP3-209ENST00000490889 BDP1A6H8Y1 2624 aa19.34■□□□□ 0.69
SRGAP3-209ENST00000490889 ZBTB5O15062 677 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 CASTP20810 708 aaKnown RBP19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 PTH1RQ03431 593 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 DGKDQ16760 1214 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 SPRED2Q7Z698 418 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 HERC6Q8IVU3 1022 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 MICALL1Q8N3F8 863 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 IL31RAQ8NI17 732 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 PDCD2LQ9BRP1 358 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 HDAC6Q9UBN7 1215 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 GTF2IRD1Q9UHL9 959 aa19.33■□□□□ 0.68
SRGAP3-209ENST00000490889 MYH7BA7E2Y1 1941 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 SORBS3O60504 671 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 F2P00734 622 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 CYP21A2P08686 494 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 ZNF286BP0CG31 522 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 HOXA13P31271 388 aaPredicted RBP19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 PSEN2P49810 448 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 TCTN1Q2MV58 587 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 STOX1Q6ZVD7 989 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 TMCO2Q7Z6W1 182 aaPredicted RBP19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 HOMER1Q86YM7 354 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 CAGE1Q8TC20 777 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 PHOSPHO2Q8TCD6 241 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 AFAP1L1Q8TED9 768 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 WNT8BQ93098 351 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 ZFP91Q96JP5 570 aaPredicted RBP19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 ALG1Q9BT22 464 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 PCDHA1Q9Y5I3 950 aa19.32■□□□□ 0.68
SRGAP3-209ENST00000490889 PRRC2BQ5JSZ5 2229 aaKnown RBP19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 HAS3O00219 553 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 CYTH3O43739 400 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 MYCLP12524 364 aaPredicted RBP19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 TAP1Q03518 808 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 RBL2Q08999 1139 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 LAMC2Q13753 1193 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 HIC1Q14526 733 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 MFSD10Q14728 455 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 GRM4Q14833 912 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 KRT40Q6A162 431 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 LRRC8DQ7L1W4 858 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 PPTC7Q8NI37 304 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 GPKOWQ92917 476 aaPredicted RBP eCLIP19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 PIGSQ96S52 555 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 MTCH2Q9Y6C9 303 aa19.31■□□□□ 0.68
SRGAP3-209ENST00000490889 BAZ2BQ9UIF8 2168 aaKnown RBP19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 TNFRSF10AO00220 468 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 NBNO60934 754 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 BAIAP3O94812 1187 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 CKBP12277 381 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 HOXD8P13378 290 aaPredicted RBP19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 SELPP16109 830 aa19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 WDR5P61964 334 aaKnown RBP19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 MRPS5P82675 430 aaKnown RBP19.3■□□□□ 0.68
SRGAP3-209ENST00000490889 ZNF200P98182 395 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms