RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 NT5DC1Q5TFE4 455 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 SULF1Q8IWU6 871 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 IGSF22Q8N9C0 903 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 ZNF280CQ8ND82 737 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 LPAR1Q92633 364 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 KLRG1Q96E93 195 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 CDK5RAP3Q96JB5 506 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 AK8Q96MA6 479 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 PYM1Q9BRP8 204 aaKnown RBP11.32□□□□□ -0.6
HDAC9-225ENST00000490851 MMTAG2Q9BU76 263 aaKnown RBP11.32□□□□□ -0.6
HDAC9-225ENST00000490851 CTDP1Q9Y5B0 961 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-225ENST00000490851 DOCK1Q14185 1865 aa11.32□□□□□ -0.6
HDAC9-225ENST00000490851 GCOM1H8Y6P7 765 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-225ENST00000490851 KIF1CO43896 1103 aaKnown RBP11.31□□□□□ -0.6
HDAC9-225ENST00000490851 POLR2MP0CAP2 368 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 GCFC2P16383 781 aaKnown RBP11.31□□□□□ -0.6
HDAC9-225ENST00000490851 STAT3P40763 770 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 STX17P56962 302 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 MYL5Q02045 173 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 FMR1Q06787 632 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDAC9-225ENST00000490851 SUPT20HL1Q3ZLR7 823 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 PRPF38AQ8NAV1 312 aaKnown RBP11.31□□□□□ -0.6
HDAC9-225ENST00000490851 CYP2W1Q8TAV3 490 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 CALML4Q96GE6 196 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 WNK4Q96J92 1243 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 BPIFA3Q9BQP9 254 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 CCSER1Q9C0I3 900 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 ZNF112Q9UJU3 913 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 SMTNL1A8MU46 457 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 FAM86B1E9PN63 330 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 GTPBP6O43824 516 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-225ENST00000490851 FAM86B2P0C5J1 330 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 ATP1A3P13637 1013 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
HDAC9-225ENST00000490851 BACE1P56817 501 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 TPM4P67936 248 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 NCAPHQ15003 741 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 PLA2G4DQ86XP0 818 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 SPATA20Q8TB22 786 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 RAB34Q9BZG1 259 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 AS3MTQ9HBK9 375 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 PCDHA12Q9UN75 941 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 MAPK8IP1Q9UQF2 711 aa11.31□□□□□ -0.6
HDAC9-225ENST00000490851 MRPL11Q9Y3B7 192 aaKnown RBP11.31□□□□□ -0.6
HDAC9-225ENST00000490851 NFIBO00712 420 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 FOSP01100 380 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-225ENST00000490851 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
HDAC9-225ENST00000490851 SREBF1P36956 1147 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 USP11P51784 963 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 USP14P54578 494 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-225ENST00000490851 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 NRBP1Q9UHY1 535 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 ZNF536O15090 1300 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 GOLGA6CA6NDK9 693 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 GOLGA6BA6NDN3 693 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 PLA2G6O60733 806 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 RPN1P04843 607 aaKnown RBP11.3□□□□□ -0.6
HDAC9-225ENST00000490851 ICAM1P05362 532 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 GOLGA6DP0CG33 693 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 TRAF1Q13077 416 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 GRB10Q13322 594 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 KRT79Q5XKE5 535 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 DPY19L2Q6NUT2 758 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 TRIML1Q8N9V2 468 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 MLKLQ8NB16 471 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 ATG4CQ96DT6 458 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 GSDMAQ96QA5 445 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 PAIP2Q9BPZ3 127 aaKnown RBP11.3□□□□□ -0.6
HDAC9-225ENST00000490851 GINM1Q9NU53 330 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 FANCLQ9NW38 375 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 GOLGA6AQ9NYA3 693 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 DACH1Q9UI36 760 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 ABCB11O95342 1321 aa11.3□□□□□ -0.6
HDAC9-225ENST00000490851 USP2O75604 605 aaPredicted RBP11.29□□□□□ -0.6
HDAC9-225ENST00000490851 VGLL4Q14135 290 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 TTLL12Q14166 644 aaPredicted RBP11.29□□□□□ -0.6
HDAC9-225ENST00000490851 MOB2Q70IA6 237 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 PNMA5Q96PV4 448 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 NAP1L4Q99733 375 aaKnown RBP11.29□□□□□ -0.6
HDAC9-225ENST00000490851 WDR18Q9BV38 432 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 GDAQ9Y2T3 454 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDAC9-225ENST00000490851 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 DYNC1I1O14576 645 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 IKBKBO14920 756 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 MCM6Q14566 821 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 PTPN21Q16825 1174 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 NCAPH2Q6IBW4 605 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 ZSCAN30Q86W11 494 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDAC9-225ENST00000490851 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
HDAC9-225ENST00000490851 HSD3B7Q9H2F3 369 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms