RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 BIN2Q9UBW5 565 aaPredicted RBP11.23□□□□□ -0.61
BRD9-209ENST00000490814 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.23□□□□□ -0.61
BRD9-209ENST00000490814 H7C1D1 291 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 SEMA3EO15041 775 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 SSBP05455 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
BRD9-209ENST00000490814 KRT83P78385 493 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 KIF5AQ12840 1032 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 PPP2R5BQ15173 497 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 TYW1BQ6NUM6 668 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 UIMC1Q96RL1 719 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 TUBGCP2Q9BSJ2 902 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 NOC4LQ9BVI4 516 aaKnown RBP11.22□□□□□ -0.61
BRD9-209ENST00000490814 MMRN2Q9H8L6 949 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 EXOC1Q9NV70 894 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 KCPQ6ZWJ8 1503 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 OPA1O60313 960 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 HSF2BPO75031 334 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 KIF5BP33176 963 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 TFAP4Q01664 338 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 PDXDC2PQ6P474 469 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 CCDC125Q86Z20 511 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 SH2D3CQ8N5H7 860 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
BRD9-209ENST00000490814 LACRTQ9GZZ8 138 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 RMI1Q9H9A7 625 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 AGPSO00116 658 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 AKR1B10O60218 316 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 SERPINB2P05120 415 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 ZNF34Q8IZ26 560 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 CNBD1Q8NA66 436 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.612e-6■■■■■ 132.4
BRD9-209ENST00000490814 KLC4Q9NSK0 619 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 LMCD1Q9NZU5 365 aa11.22□□□□□ -0.61
BRD9-209ENST00000490814 REXO2Q9Y3B8 237 aaKnown RBP11.22□□□□□ -0.61
BRD9-209ENST00000490814 SPEF2Q9C093 1822 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 CNTNAP5Q8WYK1 1306 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 MYH8P13535 1937 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 EIF3HO15372 352 aaKnown RBP eCLIP11.21□□□□□ -0.613e-8■□□□□ 8.6
BRD9-209ENST00000490814 CDR1P51861 262 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 IQCEQ6IPM2 695 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
BRD9-209ENST00000490814 STAG2Q8N3U4 1231 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 DYNLL2Q96FJ2 89 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 TMEM60Q9H2L4 133 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 DISC1Q9NRI5 854 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 TCP11L1Q9NUJ3 509 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.61
BRD9-209ENST00000490814 LGALS16A8MUM7 142 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 USP17L8P0C7I0 530 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 CALML3P27482 149 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 PRDX5P30044 214 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 CHRNA5P30532 468 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 FUT2Q10981 343 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 KCNB1Q14721 858 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 TPTE2Q6XPS3 522 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 B4GALNT4Q76KP1 1039 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 NCAPG2Q86XI2 1143 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 MYLK4Q86YV6 388 aaPredicted RBP11.21□□□□□ -0.62
BRD9-209ENST00000490814 HDAC7Q8WUI4 952 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 ARL8AQ96BM9 186 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 SMARCAL1Q9NZC9 954 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 ITIH6Q6UXX5 1313 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 FAM205AQ6ZU69 1335 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 C4AP0C0L4 1744 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 C4BP0C0L5 1744 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 PDE2AO00408 941 aaPredicted RBP11.21□□□□□ -0.62
BRD9-209ENST00000490814 SOCS7O14512 581 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 ATP2C2O75185 946 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 GYS1P13807 737 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 RNASE9P60153 205 aaKnown RBP11.21□□□□□ -0.62
BRD9-209ENST00000490814 ZRSR2Q15696 482 aaKnown RBP11.21□□□□□ -0.62
BRD9-209ENST00000490814 ERFEQ4G0M1 354 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 RCSD1Q6JBY9 416 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 C2CD5Q86YS7 1000 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 PYM1Q9BRP8 204 aaKnown RBP11.21□□□□□ -0.62
BRD9-209ENST00000490814 LRRC1Q9BTT6 524 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.62
BRD9-209ENST00000490814 LRWD1Q9UFC0 647 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 DDX20Q9UHI6 824 aaKnown RBP11.21□□□□□ -0.62
BRD9-209ENST00000490814 FAM184BQ9ULE4 1060 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.21□□□□□ -0.62
BRD9-209ENST00000490814 ADAMTS7Q9UKP4 1686 aa11.21□□□□□ -0.62
BRD9-209ENST00000490814 MYO5AQ9Y4I1 1855 aaKnown RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 ERVV-1B6SEH8 477 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 DDAH1O94760 285 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 KLRK1P26718 216 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 RANBP1P43487 201 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 SLC8A3P57103 927 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 HERVK_113P62684 666 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 TDRD12Q587J7 1177 aaKnown RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 CDCA2Q69YH5 1023 aaPredicted RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 DYMQ7RTS9 669 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 PNMA1Q8ND90 353 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 TSPAN18Q96SJ8 248 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 RIOK1Q9BRS2 568 aaKnown RBP11.2□□□□□ -0.62
BRD9-209ENST00000490814 MAF1Q9H063 256 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 SLC39A2Q9NP94 309 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 HOMER3Q9NSC5 361 aa11.2□□□□□ -0.62
BRD9-209ENST00000490814 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms