RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PTH1RQ03431 593 aa22.89■■□□□ 1.25
SREBF1-216ENST00000490796 ARHGAP1Q07960 439 aa22.89■■□□□ 1.25
SREBF1-216ENST00000490796 PTGISQ16647 500 aa22.89■■□□□ 1.25
SREBF1-216ENST00000490796 DGKDQ16760 1214 aa22.89■■□□□ 1.25
SREBF1-216ENST00000490796 PPM1EQ8WY54 764 aa22.89■■□□□ 1.25
SREBF1-216ENST00000490796 PALM3A6NDB9 673 aaPredicted RBP22.88■■□□□ 1.25
SREBF1-216ENST00000490796 PITPNM1O00562 1244 aa22.88■■□□□ 1.25
SREBF1-216ENST00000490796 IGFBP4P22692 258 aa22.88■■□□□ 1.25
SREBF1-216ENST00000490796 HSD17B4P51659 736 aa22.88■■□□□ 1.25
SREBF1-216ENST00000490796 LAMC2Q13753 1193 aa22.88■■□□□ 1.25
SREBF1-216ENST00000490796 GRM4Q14833 912 aa22.88■■□□□ 1.25
SREBF1-216ENST00000490796 CATIPQ7Z7H3 387 aa22.88■■□□□ 1.25
SREBF1-216ENST00000490796 DHX37Q8IY37 1157 aaKnown RBP22.88■■□□□ 1.25
SREBF1-216ENST00000490796 SAMD3Q8N6K7 520 aa22.88■■□□□ 1.25
SREBF1-216ENST00000490796 DDX41Q9UJV9 622 aaKnown RBP22.88■■□□□ 1.25
SREBF1-216ENST00000490796 E7EWF7 191 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 GCOM1H8Y6P7 765 aaPredicted RBP22.87■■□□□ 1.25
SREBF1-216ENST00000490796 POLR2MP0CAP2 368 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 RABGGTBP53611 331 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 PPP2R2DQ66LE6 453 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 KCNV1Q6PIU1 500 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 C7orf31Q8N865 590 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 MTMR8Q96EF0 704 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 KATNAL1Q9BW62 490 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 YBX2Q9Y2T7 364 aaKnown RBP22.87■■□□□ 1.25
SREBF1-216ENST00000490796 PCDHA11Q9Y5I1 949 aa22.87■■□□□ 1.25
SREBF1-216ENST00000490796 IQCF3P0C7M6 154 aa22.86■■□□□ 1.25
SREBF1-216ENST00000490796 HOXA13P31271 388 aaPredicted RBP22.86■■□□□ 1.25
SREBF1-216ENST00000490796 TMEM67Q5HYA8 995 aa22.86■■□□□ 1.25
SREBF1-216ENST00000490796 CAGE1Q8TC20 777 aa22.86■■□□□ 1.25
SREBF1-216ENST00000490796 SYMPKQ92797 1274 aaKnown RBP22.86■■□□□ 1.25
SREBF1-216ENST00000490796 PIGSQ96S52 555 aa22.86■■□□□ 1.25
SREBF1-216ENST00000490796 PDCD2LQ9BRP1 358 aa22.86■■□□□ 1.25
SREBF1-216ENST00000490796 SGSM2O43147 1006 aa22.85■■□□□ 1.25
SREBF1-216ENST00000490796 PPP1R11O60927 126 aaPredicted RBP22.85■■□□□ 1.25
SREBF1-216ENST00000490796 FCHSD1Q86WN1 690 aa22.85■■□□□ 1.25
SREBF1-216ENST00000490796 EMID1Q96A84 441 aaPredicted RBP22.85■■□□□ 1.25
SREBF1-216ENST00000490796 ALG1Q9BT22 464 aa22.85■■□□□ 1.25
SREBF1-216ENST00000490796 EYSQ5T1H1 3165 aa22.85■■□□□ 1.25
SREBF1-216ENST00000490796 PNMA6FA0A0J9YX94 578 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 OPLAHO14841 1288 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 CCND2P30279 289 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 PSEN2P49810 448 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 GHRHRQ02643 423 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 GDF6Q6KF10 455 aaPredicted RBP22.84■■□□□ 1.25
SREBF1-216ENST00000490796 STOX1Q6ZVD7 989 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 SESTD1Q86VW0 696 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 PPTC7Q8NI37 304 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 AFAP1L1Q8TED9 768 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 RIOX1Q9H6W3 641 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 PRUNE2Q8WUY3 3088 aa22.84■■□□□ 1.25
SREBF1-216ENST00000490796 BAZ2BQ9UIF8 2168 aaKnown RBP22.83■■□□□ 1.25
SREBF1-216ENST00000490796 KIAA1217Q5T5P2 1943 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 KIF28PB7ZC32 967 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 PGM5Q15124 567 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 CASC1Q6TDU7 716 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 USP38Q8NB14 1042 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 PIBF1Q8WXW3 757 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 KAT2BQ92831 832 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 SPATA33Q96N06 139 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 SLC9A7Q96T83 725 aa22.83■■□□□ 1.25
SREBF1-216ENST00000490796 TTC28Q96AY4 2481 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 SORBS3O60504 671 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 MYOGP15173 224 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 KCNJ6P48051 423 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 MFSD10Q14728 455 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 KIAA0753Q2KHM9 967 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 VSIG10LQ86VR7 867 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 CTCFLQ8NI51 663 aaPredicted RBP22.82■■□□□ 1.24
SREBF1-216ENST00000490796 PHOSPHO2Q8TCD6 241 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 VWCEQ96DN2 955 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 SENP2Q9HC62 589 aa22.82■■□□□ 1.24
SREBF1-216ENST00000490796 RBM8AQ9Y5S9 174 aaKnown RBP22.82■■□□□ 1.24
SREBF1-216ENST00000490796 GGPS1O95749 300 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 ZNF286BP0CG31 522 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 TGFB3P10600 412 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 SELPP16109 830 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 KIF5BP33176 963 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 TROAPQ12815 778 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 CCDC85BQ15834 202 aaPredicted RBP22.81■■□□□ 1.24
SREBF1-216ENST00000490796 CELF3Q5SZQ8 465 aaKnown RBP22.81■■□□□ 1.24
SREBF1-216ENST00000490796 MAP4K1Q92918 833 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 MLXIPQ9HAP2 919 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 HDAC6Q9UBN7 1215 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 GTF2IRD1Q9UHL9 959 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 TAF6LQ9Y6J9 622 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 SCN5AQ14524 2016 aa22.81■■□□□ 1.24
SREBF1-216ENST00000490796 PPFIA4O75335 1185 aa22.8■■□□□ 1.24
SREBF1-216ENST00000490796 BAIAP3O94812 1187 aa22.8■■□□□ 1.24
SREBF1-216ENST00000490796 PARNO95453 639 aaKnown RBP22.8■■□□□ 1.24
SREBF1-216ENST00000490796 ADGRE1Q14246 886 aa22.8■■□□□ 1.24
SREBF1-216ENST00000490796 GNPTABQ3T906 1256 aa22.8■■□□□ 1.24
SREBF1-216ENST00000490796 TJAP1Q5JTD0 557 aa22.8■■□□□ 1.24
SREBF1-216ENST00000490796 MYSM1Q5VVJ2 828 aa22.8■■□□□ 1.24
SREBF1-216ENST00000490796 NFXL1Q6ZNB6 911 aa22.8■■□□□ 1.24
SREBF1-216ENST00000490796 LRRC8DQ7L1W4 858 aa22.8■■□□□ 1.24
SREBF1-216ENST00000490796 TSPYL2Q9H2G4 693 aaPredicted RBP22.8■■□□□ 1.24
SREBF1-216ENST00000490796 SEC63Q9UGP8 760 aaKnown RBP22.8■■□□□ 1.24
SREBF1-216ENST00000490796 CYTH3O43739 400 aa22.79■■□□□ 1.24
SREBF1-216ENST00000490796 F2P00734 622 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms