RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TPH2Q8IWU9 490 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 CHST14Q8NCH0 376 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 NAXEQ8NCW5 288 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 SPPL3Q8TCT6 385 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 KCTD13Q8WZ19 329 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 HERVK_113Q902F9 699 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 CLIP3Q96DZ5 547 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 ZNF837Q96EG3 531 aaPredicted RBP3.71□□□□□ -1.82
UBXN4-208ENST00000490163 C1GALT1C1Q96EU7 318 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 TMEM41AQ96HV5 264 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 MPP4Q96JB8 637 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 B3GALT1Q9Y5Z6 326 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 J3KRW8 73 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 K7ENM7 598 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 AGRPO00253 132 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 NCAM2O15394 837 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 TGFB3P10600 412 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 NKX6-1P78426 367 aaPredicted RBP3.71□□□□□ -1.82
UBXN4-208ENST00000490163 APBA1Q02410 837 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 DSC2Q02487 901 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 C21orf62-AS1Q17RA5 79 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 CCDC184Q52MB2 194 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 COBLL1Q53SF7 1204 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 WIPI1Q5MNZ9 446 aaPredicted RBP3.71□□□□□ -1.82
UBXN4-208ENST00000490163 UBXN11Q5T124 520 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 JADE3Q92613 823 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 KREMEN1Q96MU8 473 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 IFT122Q9HBG6 1241 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 NMRK2Q9NPI5 230 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 WASH6PQ9NQA3 447 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 RUSC2Q8N2Y8 1516 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 FAM227AF5H4B4 570 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 H7C1W4 665 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 AURKAO14965 403 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 PLA2G6O60733 806 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 ZNF205O95201 554 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 THP07101 528 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 CNGA1P29973 690 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 EPHA7Q15375 998 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 EMC4Q5J8M3 183 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 TSHZ3Q63HK5 1081 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 SYDE1Q6ZW31 735 aaPredicted RBP3.7□□□□□ -1.82
UBXN4-208ENST00000490163 CACNA2D3Q8IZS8 1091 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 DIS3LQ8TF46 1054 aaKnown RBP3.7□□□□□ -1.82
UBXN4-208ENST00000490163 COG1Q8WTW3 980 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 TIFAQ96CG3 184 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 NUCKS1Q9H1E3 243 aaKnown RBP3.7□□□□□ -1.82
UBXN4-208ENST00000490163 RUBCNLQ9H714 662 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 ALG13Q9NP73 1137 aaKnown RBP3.7□□□□□ -1.82
UBXN4-208ENST00000490163 VTA1Q9NP79 307 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 AASDHPPTQ9NRN7 309 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 PCDHB10Q9UN67 800 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 CUX1P39880 1505 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 TERTO14746 1132 aaKnown RBP3.7□□□□□ -1.82
UBXN4-208ENST00000490163 CLASP2O75122 1294 aaKnown RBP3.7□□□□□ -1.82
UBXN4-208ENST00000490163 FGF18O76093 207 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 RHOBTB3O94955 611 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 AMY2AP04746 511 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 AMY2BP19961 511 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 RPS6KB1P23443 525 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 OCRLQ01968 901 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 C19orf57Q0VDD7 668 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 PPFIA1Q13136 1202 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 SF1Q15637 639 aaKnown RBP3.7□□□□□ -1.82
UBXN4-208ENST00000490163 HEATR6Q6AI08 1181 aaKnown RBP3.7□□□□□ -1.82
UBXN4-208ENST00000490163 XRRA1Q6P2D8 792 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 CCDC103Q8IW40 242 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 CPXCR1Q8N123 301 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 OR2C3Q8N628 320 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 PPP1R14AQ96A00 147 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 TEKT5Q96M29 485 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 MYD88Q99836 296 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 ANP32EQ9BTT0 268 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 TWSG1Q9GZX9 223 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 ATP6V0A4Q9HBG4 840 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 SAMD15Q9P1V8 674 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 INTUQ9ULD6 942 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 CAPN11Q9UMQ6 739 aa3.7□□□□□ -1.82
UBXN4-208ENST00000490163 SIGLEC6O43699 453 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 AUHQ13825 339 aaKnown RBP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 LAPTM4AQ15012 233 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 C1QTNF12Q5T7M4 302 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 HERC6Q8IVU3 1022 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 UBR7Q8N806 425 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 PPHLN1Q8NEY8 458 aaKnown RBP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 ZNF526Q8TF50 670 aaPredicted RBP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 CHTF18Q8WVB6 975 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 COA7Q96BR5 231 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 NAP1L4Q99733 375 aaKnown RBP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 SLC12A9Q9BXP2 914 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 TTLL3Q9Y4R7 772 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 PMM2O15305 246 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 KCNQ3O43525 872 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 ADAM11O75078 769 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 HSP90AA1P07900 732 aaKnown RBP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 NEUROD1Q13562 356 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 GNPTABQ3T906 1256 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 EXOSC6Q5RKV6 272 aaKnown RBP3.69□□□□□ -1.82
UBXN4-208ENST00000490163 IZUMO3Q5VZ72 239 aa3.69□□□□□ -1.82
UBXN4-208ENST00000490163 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms