RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 TMEM260Q9NX78 707 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.24□□□□□ -0.13
HDAC1-210ENST00000490081 PTCH2Q9Y6C5 1203 aa14.24□□□□□ -0.13
HDAC1-210ENST00000490081 CCDC194A0A1B0GVG4 234 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 STX6O43752 255 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 EDIL3O43854 480 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 SLC34A2O95436 690 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 ICAM3P32942 547 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 DDIT3P35638 169 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 TRAPPC10P48553 1259 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 MRPS9P82933 396 aaKnown RBP14.23□□□□□ -0.13
HDAC1-210ENST00000490081 PDE4DQ08499 809 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 NR5A1Q13285 461 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 ORC2Q13416 577 aaPredicted RBP14.23□□□□□ -0.13
HDAC1-210ENST00000490081 IQSEC1Q6DN90 963 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 PPP4R3AQ6IN85 833 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 KCNV1Q6PIU1 500 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 BRAPQ7Z569 592 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 NOSTRINQ8IVI9 506 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 ARMC5Q96C12 935 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 MBOAT7Q96N66 472 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 CNPY2Q9Y2B0 182 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 UBIAD1Q9Y5Z9 338 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 HTTP42858 3142 aa14.23□□□□□ -0.13
HDAC1-210ENST00000490081 MEIS1O00470 390 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 ZNF865P0CJ78 1059 aaPredicted RBP14.22□□□□□ -0.13
HDAC1-210ENST00000490081 CYBAP13498 195 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 GCFC2P16383 781 aaKnown RBP14.22□□□□□ -0.13
HDAC1-210ENST00000490081 EIF2AK2P19525 551 aaKnown RBP14.22□□□□□ -0.13
HDAC1-210ENST00000490081 ACVR2BQ13705 512 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 TAPT1Q6NXT6 567 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 RASGRP4Q8TDF6 673 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 TBCKQ8TEA7 893 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 GPRASP2Q96D09 838 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 CDHR1Q96JP9 859 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 ZSCAN16Q9H4T2 348 aaPredicted RBP14.22□□□□□ -0.13
HDAC1-210ENST00000490081 MTMR6Q9Y217 621 aa14.22□□□□□ -0.13
HDAC1-210ENST00000490081 SPATA31C2B4DYI2 1134 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 RGS20O76081 388 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 ECM2O94769 699 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-210ENST00000490081 CYP2C19P33261 490 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 UBXN2AP68543 259 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 GUCY1B3Q02153 619 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 CACNB2Q08289 660 aaPredicted RBP14.21□□□□□ -0.13
HDAC1-210ENST00000490081 GNPTABQ3T906 1256 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 CEP55Q53EZ4 464 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 NEK8Q86SG6 692 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 IL31RAQ8NI17 732 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 SENP7Q9BQF6 1050 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 MXRA8Q9BRK3 442 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 JADE2Q9NQC1 790 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 Q9Y3F1 56 aa14.21□□□□□ -0.13
HDAC1-210ENST00000490081 PDE4DIPQ5VU43 2346 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 NKRFO15226 690 aaKnown RBP eCLIP14.2□□□□□ -0.14
HDAC1-210ENST00000490081 SEPT4O43236 478 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 MSCO60682 206 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 ELNP15502 786 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 ITGB5P18084 799 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 NKX3-2P78367 333 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 SLC9C1Q4G0N8 1177 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 Q4G0T1 1027 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 RILPL1Q5EBL4 403 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 EARS2Q5JPH6 523 aaKnown RBP14.2□□□□□ -0.14
HDAC1-210ENST00000490081 CCDC62Q6P9F0 684 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 PIK3AP1Q6ZUJ8 805 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 NLRX1Q86UT6 975 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 SCFD2Q8WU76 684 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
HDAC1-210ENST00000490081 DAXXQ9UER7 740 aaPredicted RBP14.2□□□□□ -0.14
HDAC1-210ENST00000490081 IGLV3-22A0A075B6J6 115 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 POTEFA5A3E0 1075 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 KIF28PB7ZC32 967 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 TBX3O15119 743 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 FIBPO43427 364 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 INHAP05111 366 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 ZSCAN22P10073 491 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 MYCLP12524 364 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 SETQ01105 290 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 GNL2Q13823 731 aaKnown RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 INF2Q27J81 1249 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 GIMAP8Q8ND71 665 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 TRPV1Q8NER1 839 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 ZNF333Q96JL9 665 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 IPO9Q96P70 1041 aaKnown RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 HMX1Q9NP08 348 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 FAM184BQ9ULE4 1060 aa14.19□□□□□ -0.14
HDAC1-210ENST00000490081 CIZ1Q9ULV3 898 aaPredicted RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 NOL7Q9UMY1 257 aaKnown RBP14.19□□□□□ -0.14
HDAC1-210ENST00000490081 FAM86B1E9PN63 330 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 BRD1O95696 1058 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 FAM86B2P0C5J1 330 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 AKR1A1P14550 325 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 NUCB2P80303 420 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 RESTQ13127 1097 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 TTLL4Q14679 1199 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 CCDC144BQ3MJ40 725 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 DUSP28Q4G0W2 176 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 ATL3Q6DD88 541 aa14.18□□□□□ -0.14
HDAC1-210ENST00000490081 MCTP1Q6DN14 999 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms