RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 TMCO2Q7Z6W1 182 aaPredicted RBP9.56□□□□□ -0.88
SMG5-205ENST00000489907 DGKHQ86XP1 1220 aa9.56□□□□□ -0.88
SMG5-205ENST00000489907 AFG1LQ8WV93 481 aa9.56□□□□□ -0.88
SMG5-205ENST00000489907 WNT8BQ93098 351 aa9.56□□□□□ -0.88
SMG5-205ENST00000489907 ZKSCAN3Q9BRR0 538 aa9.56□□□□□ -0.88
SMG5-205ENST00000489907 EPHX3Q9H6B9 360 aa9.56□□□□□ -0.88
SMG5-205ENST00000489907 GPHNQ9NQX3 736 aaPredicted RBP9.56□□□□□ -0.88
SMG5-205ENST00000489907 DDX41Q9UJV9 622 aaKnown RBP9.56□□□□□ -0.88
SMG5-205ENST00000489907 PNMA2Q9UL42 364 aa9.56□□□□□ -0.88
SMG5-205ENST00000489907 CCDC171Q6TFL3 1326 aa9.56□□□□□ -0.88
SMG5-205ENST00000489907 BAIAP3O94812 1187 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 ACTN1P12814 892 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 HOXD8P13378 290 aaPredicted RBP9.55□□□□□ -0.88
SMG5-205ENST00000489907 WDR5P61964 334 aaKnown RBP9.55□□□□□ -0.88
SMG5-205ENST00000489907 DEFB103AP81534 67 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 MBTPS1Q14703 1052 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 USH1GQ495M9 461 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 GPATCH4Q5T3I0 446 aaKnown RBP9.55□□□□□ -0.88
SMG5-205ENST00000489907 MFSD6Q6ZSS7 791 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 ADGRF4Q8IZF3 695 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 MICALL1Q8N3F8 863 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 AFAP1L1Q8TED9 768 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 ARNTL2Q8WYA1 636 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 EMID1Q96A84 441 aaPredicted RBP9.55□□□□□ -0.88
SMG5-205ENST00000489907 JMJD4Q9H9V9 463 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 CD320Q9NPF0 282 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 TOMM22Q9NS69 142 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 ZSWIM5Q9P217 1185 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 GTF2IRD1Q9UHL9 959 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 MICAL3Q7RTP6 2002 aa9.55□□□□□ -0.88
SMG5-205ENST00000489907 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.54□□□□□ -0.88
SMG5-205ENST00000489907 CKBP12277 381 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 SDSP20132 328 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 BFSP2Q13515 415 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 CDC37Q16543 378 aaPredicted RBP9.54□□□□□ -0.88
SMG5-205ENST00000489907 SLC35G1Q2M3R5 365 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 B4GALNT3Q6L9W6 998 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 RETREG2Q8NC44 543 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 PNMA1Q8ND90 353 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 CAGE1Q8TC20 777 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 MTMR8Q96EF0 704 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 IWS1Q96ST2 819 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 FTOQ9C0B1 505 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMG5-205ENST00000489907 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
SMG5-205ENST00000489907 OSBPL3Q9H4L5 887 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 SUGCTQ9HAC7 445 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 C11orf16Q9NQ32 467 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 LMCD1Q9NZU5 365 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 HDAC6Q9UBN7 1215 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 COG5Q9UP83 839 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 ATG2AQ2TAZ0 1938 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 ABCB11O95342 1321 aa9.54□□□□□ -0.88
SMG5-205ENST00000489907 DOCK5Q9H7D0 1870 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 PPP1R11O60927 126 aaPredicted RBP9.53□□□□□ -0.88
SMG5-205ENST00000489907 GJB5O95377 273 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 F2P00734 622 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 GH1P01241 217 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 SELPP16109 830 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 CASTP20810 708 aaKnown RBP9.53□□□□□ -0.88
SMG5-205ENST00000489907 PLA2G5P39877 138 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 HSD17B4P51659 736 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 ERVK-21P61565 698 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 ZNF200P98182 395 aaPredicted RBP9.53□□□□□ -0.88
SMG5-205ENST00000489907 SP2Q02086 613 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 STXBP2Q15833 593 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 AAK1Q2M2I8 961 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 QRICH1Q2TAL8 776 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 BRDTQ58F21 947 aaPredicted RBP9.53□□□□□ -0.88
SMG5-205ENST00000489907 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 CNKSR3Q6P9H4 555 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 SEPT14Q6ZU15 432 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 LRRC8DQ7L1W4 858 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 PLEKHM2Q8IWE5 1019 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 STAG2Q8N3U4 1231 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 ENAHQ8N8S7 591 aaPredicted RBP9.53□□□□□ -0.88
SMG5-205ENST00000489907 NSUN6Q8TEA1 469 aaKnown RBP9.53□□□□□ -0.88
SMG5-205ENST00000489907 RMDN3Q96TC7 470 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 LRFN3Q9BTN0 628 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 OSBPL7Q9BZF2 842 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 IL25Q9H293 177 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 RWDD1Q9H446 243 aaPredicted RBP9.53□□□□□ -0.88
SMG5-205ENST00000489907 PXMP2Q9NR77 195 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 U3KPZ7 1027 aaPredicted RBP9.53□□□□□ -0.88
SMG5-205ENST00000489907 RAD50Q92878 1312 aa9.53□□□□□ -0.88
SMG5-205ENST00000489907 B4DLN1 442 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 B4E1Z4 1266 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 ZNF213O14771 459 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
SMG5-205ENST00000489907 KDM4AO75164 1064 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 EIF3JO75822 258 aaKnown RBP9.52□□□□□ -0.89
SMG5-205ENST00000489907 PARNO95453 639 aaKnown RBP9.52□□□□□ -0.89
SMG5-205ENST00000489907 NR3C2P08235 984 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 HOXC8P31273 242 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 PSEN2P49810 448 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 MRPL12P52815 198 aaKnown RBP9.52□□□□□ -0.89
SMG5-205ENST00000489907 PTK7Q13308 1070 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 SEC23AQ15436 765 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 HSDL1Q3SXM5 330 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 ZNF618Q5T7W0 954 aa9.52□□□□□ -0.89
SMG5-205ENST00000489907 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms