RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SGSM2O43147 1006 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 TMEM253P0C7T8 217 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 SUMO1P63165 101 aaKnown RBP7.94□□□□□ -1.14
CCDC39-206ENST00000489868 TMEM62Q0P6H9 643 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 SQSTM1Q13501 440 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 LBX2Q6XYB7 198 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 RIOX2Q8IUF8 465 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 MZB1Q8WU39 189 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 CHAMP1Q96JM3 812 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 PPP1R16BQ96T49 567 aa7.94□□□□□ -1.14
CCDC39-206ENST00000489868 H7BY64 318 aa7.93□□□□□ -1.14
CCDC39-206ENST00000489868 GTF2A2P52657 109 aa7.93□□□□□ -1.14
CCDC39-206ENST00000489868 GPR85P60893 370 aa7.93□□□□□ -1.14
CCDC39-206ENST00000489868 OLFML2BQ68BL8 750 aa7.93□□□□□ -1.14
CCDC39-206ENST00000489868 TSPAN17Q96FV3 270 aa7.93□□□□□ -1.14
CCDC39-206ENST00000489868 MRFAP1L1Q96HT8 127 aa7.93□□□□□ -1.14
CCDC39-206ENST00000489868 JAM3Q9BX67 310 aa7.93□□□□□ -1.14
CCDC39-206ENST00000489868 EPB41L4AQ9HCS5 686 aaPredicted RBP7.93□□□□□ -1.14
CCDC39-206ENST00000489868 USP35Q9P2H5 1018 aa7.93□□□□□ -1.14
CCDC39-206ENST00000489868 DBR1Q9UK59 544 aaKnown RBP7.93□□□□□ -1.14
CCDC39-206ENST00000489868 SMG5Q9UPR3 1016 aaKnown RBP7.93□□□□□ -1.14
CCDC39-206ENST00000489868 NFIBO00712 420 aa7.92□□□□□ -1.14
CCDC39-206ENST00000489868 IRS4O14654 1257 aaPredicted RBP7.92□□□□□ -1.14
CCDC39-206ENST00000489868 N4BP3O15049 544 aa7.92□□□□□ -1.14
CCDC39-206ENST00000489868 MC3RP41968 323 aa7.92□□□□□ -1.14
CCDC39-206ENST00000489868 RAP1GAPP47736 663 aa7.92□□□□□ -1.14
CCDC39-206ENST00000489868 SSPNQ14714 243 aa7.92□□□□□ -1.14
CCDC39-206ENST00000489868 MROH9Q5TGP6 573 aa7.92□□□□□ -1.14
CCDC39-206ENST00000489868 PEX11GQ96HA9 241 aa7.92□□□□□ -1.14
CCDC39-206ENST00000489868 ASGR2P07307 311 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 ATF2P15336 505 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 IGFBP6P24592 240 aaPredicted RBP7.91□□□□□ -1.14
CCDC39-206ENST00000489868 PMLP29590 882 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 PKN1Q16512 942 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 TMEFF1Q8IYR6 380 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 IFNL3Q8IZI9 196 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.91□□□□□ -1.14
CCDC39-206ENST00000489868 SH3TC2Q8TF17 1288 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
CCDC39-206ENST00000489868 PTPRN2Q92932 1015 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 ZFYVE21Q9BQ24 234 aa7.91□□□□□ -1.14
CCDC39-206ENST00000489868 NPIPB6E9PJ23 425 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 SLC6A11P48066 632 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 LINC00310P59036 64 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 DCP2Q8IU60 420 aaKnown RBP7.9□□□□□ -1.14
CCDC39-206ENST00000489868 ZSWIM2Q8NEG5 633 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 PANK1Q8TE04 598 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 ALG3Q92685 438 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 SLC52A2Q9HAB3 445 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 NUDT5Q9UKK9 219 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 PALD1Q9ULE6 856 aa7.9□□□□□ -1.14
CCDC39-206ENST00000489868 TCAF2A6NFQ2 919 aa7.89□□□□□ -1.15
CCDC39-206ENST00000489868 GRK2P25098 689 aa7.89□□□□□ -1.15
CCDC39-206ENST00000489868 GRK3P35626 688 aa7.89□□□□□ -1.15
CCDC39-206ENST00000489868 KCNA10Q16322 511 aa7.89□□□□□ -1.15
CCDC39-206ENST00000489868 KIZQ2M2Z5 673 aa7.89□□□□□ -1.15
CCDC39-206ENST00000489868 ZC3H12BQ5HYM0 836 aaKnown RBP7.89□□□□□ -1.15
CCDC39-206ENST00000489868 MAMDC2Q7Z304 686 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-206ENST00000489868 SLC7A14Q8TBB6 771 aa7.89□□□□□ -1.15
CCDC39-206ENST00000489868 SEC14L1Q92503 715 aa7.89□□□□□ -1.15
CCDC39-206ENST00000489868 RNPC3Q96LT9 517 aaKnown RBP7.89□□□□□ -1.15
CCDC39-206ENST00000489868 IPO9Q96P70 1041 aaKnown RBP7.89□□□□□ -1.15
CCDC39-206ENST00000489868 COA3Q9Y2R0 106 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-206ENST00000489868 PCDHA8Q9Y5H6 950 aa7.89□□□□□ -1.15
CCDC39-206ENST00000489868 BUB1BO60566 1050 aaPredicted RBP7.88□□□□□ -1.15
CCDC39-206ENST00000489868 PI3P19957 117 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 LIMS1P48059 325 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 GABREP78334 506 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 SLC9A5Q14940 896 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 C1QL4Q86Z23 238 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 GSTCDQ8NEC7 633 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 PIP4K2CQ8TBX8 421 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 SIGLEC10Q96LC7 697 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 KCNJ15Q99712 375 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 AP5M1Q9H0R1 490 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 EPB41L1Q9H4G0 881 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 IPPKQ9H8X2 491 aa7.88□□□□□ -1.15
CCDC39-206ENST00000489868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.87□□□□□ -1.15
CCDC39-206ENST00000489868 TADA3O75528 432 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 ZBTB7AO95365 584 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 SOD2P04179 222 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 TRIM61Q5EBN2 209 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 EMC4Q5J8M3 183 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 STEAP3Q658P3 488 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 MILR1Q7Z6M3 343 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 JAZF1Q86VZ6 243 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 ANKLE2Q86XL3 938 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 SCLYQ96I15 445 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 SYT3Q9BQG1 590 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 NCOA5Q9HCD5 579 aaKnown RBP7.87□□□□□ -1.15
CCDC39-206ENST00000489868 NDOR1Q9UHB4 597 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 PCDHA9Q9Y5H5 950 aa7.87□□□□□ -1.15
CCDC39-206ENST00000489868 ESYT3A0FGR9 886 aa7.86□□□□□ -1.15
CCDC39-206ENST00000489868 DBX1A6NMT0 343 aa7.86□□□□□ -1.15
CCDC39-206ENST00000489868 ARVCFO00192 962 aa7.86□□□□□ -1.15
CCDC39-206ENST00000489868 DGKIO75912 1065 aa7.86□□□□□ -1.15
CCDC39-206ENST00000489868 CRTAMO95727 393 aa7.86□□□□□ -1.15
CCDC39-206ENST00000489868 COL6A2P12110 1019 aa7.86□□□□□ -1.15
CCDC39-206ENST00000489868 CFPP27918 469 aa7.86□□□□□ -1.15
CCDC39-206ENST00000489868 HABP4Q5JVS0 413 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms