RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 PKN2Q16513 984 aaKnown RBP8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 LMBR1LQ6UX01 489 aa8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 ARMC9Q7Z3E5 817 aa8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 APOBEC3FQ8IUX4 373 aaKnown RBP8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 C2CD4AQ8NCU7 369 aaPredicted RBP8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 ZNF296Q8WUU4 475 aaPredicted RBP8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 KAZALD1Q96I82 304 aa8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 R3HDMLQ9H3Y0 253 aa8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 MRS2Q9HD23 443 aa8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 TMEM39AQ9NV64 488 aa8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 PCDHAC2Q9Y5I4 1007 aa8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 PAPPA2Q9BXP8 1791 aa8.05□□□□□ -1.12
PRPF40A-210ENST00000489741 AOX1Q06278 1338 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 GRM8O00222 908 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 ALDH1L1O75891 902 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 P4HBP07237 508 aaKnown RBP8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 GSTT1P30711 240 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 NF2P35240 595 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 HNRNPUQ00839 825 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 DLGAP5Q15398 846 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 LDHAL6AQ6ZMR3 332 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 SND1Q7KZF4 910 aaKnown RBP eCLIP8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 DYMQ7RTS9 669 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 TDRD7Q8NHU6 1098 aaKnown RBP8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 FBLIM1Q8WUP2 373 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 PRMT6Q96LA8 375 aaPredicted RBP8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 PPP2R3BQ9Y5P8 575 aa8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 MKI67P46013 3256 aaKnown RBP8.04□□□□□ -1.12
PRPF40A-210ENST00000489741 UTYO14607 1347 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 FAM205AQ6ZU69 1335 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 ZNF521Q96K83 1311 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 PSME4Q14997 1843 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 FAM95CA0A1B0GW59 222 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 TGFB1P01137 390 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 RAB6AP20340 208 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 KCNJ4P48050 445 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 INHBEP58166 350 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 SREBF2Q12772 1141 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 UBE4AQ14139 1066 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 CCDC57Q2TAC2 916 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 CFAP100Q494V2 611 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 PAOXQ6QHF9 649 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 ZNF804AQ7Z570 1209 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 NBPF11Q86T75 865 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 FAM84BQ96KN1 310 aaPredicted RBP8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 FZD1Q9UP38 647 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 RIPOR2Q9Y4F9 1068 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 ACTL7BQ9Y614 415 aa8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 ZNF646O15015 1829 aaPredicted RBP8.03□□□□□ -1.12
PRPF40A-210ENST00000489741 PDE4DIPQ5VU43 2346 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 ANP32CO43423 234 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 USP2O75604 605 aaPredicted RBP8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 LDHBP07195 334 aaKnown RBP8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 SSTR4P31391 388 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 PRKG1Q13976 671 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 NFKBIBQ15653 356 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 RABL6Q3YEC7 729 aaPredicted RBP8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 SUPT20HL1Q3ZLR7 823 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 NBPF12Q5TAG4 269 aaPredicted RBP8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 CDPF1Q6NVV7 123 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 FBXO33Q7Z6M2 555 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 ZDHHC13Q8IUH4 622 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 FBXL6Q8N531 539 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 SHKBP1Q8TBC3 707 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 SUCLG2Q96I99 432 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 CLMNQ96JQ2 1002 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 MFSD14AQ96MC6 490 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 PUS3Q9BZE2 481 aaKnown RBP8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 SRCIN1Q9C0H9 1055 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 PCMTD2Q9NV79 361 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 ANGEL1Q9UNK9 670 aaKnown RBP8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 CENPFP49454 3210 aa8.02□□□□□ -1.13
PRPF40A-210ENST00000489741 SSC5DA1L4H1 1573 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 COL1A1P02452 1464 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 CLRN2A0PK11 232 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 MANSC4A6NHS7 340 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 HYAL3O43820 417 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 FKTNO75072 461 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 NBPF7P0C2Y1 421 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 ZBTB48P10074 688 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 HIBADHP31937 336 aaKnown RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 SOX10P56693 466 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 RASA3Q14644 834 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 FBXO46Q6PJ61 603 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 SULF2Q8IWU5 870 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 GIMAP7Q8NHV1 300 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 WNK4Q96J92 1243 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 TEPSINQ96N21 525 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 WDR18Q9BV38 432 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 MRIQ9BWK5 157 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 CCDC86Q9H6F5 360 aaKnown RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 C9orf78Q9NZ63 289 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 ZNF70Q9UC06 446 aaPredicted RBP8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 BRCA2P51587 3418 aa8.01□□□□□ -1.13
PRPF40A-210ENST00000489741 WDR64B1ANS9 1081 aa8□□□□□ -1.13
PRPF40A-210ENST00000489741 F8W031 263 aaPredicted RBP8□□□□□ -1.13
PRPF40A-210ENST00000489741 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
PRPF40A-210ENST00000489741 GIPC1O14908 333 aa8□□□□□ -1.13
PRPF40A-210ENST00000489741 MYO1BO43795 1136 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms