RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 CD4P01730 458 aa20.57■□□□□ 0.88
ABCF3-217ENST00000489719 FPGSQ05932 587 aa20.57■□□□□ 0.88
ABCF3-217ENST00000489719 SHHQ15465 462 aa20.57■□□□□ 0.88
ABCF3-217ENST00000489719 APOA5Q6Q788 366 aa20.57■□□□□ 0.88
ABCF3-217ENST00000489719 TMTC3Q6ZXV5 915 aa20.57■□□□□ 0.88
ABCF3-217ENST00000489719 AFG1LQ8WV93 481 aa20.57■□□□□ 0.88
ABCF3-217ENST00000489719 JAKMIP1Q96N16 626 aaKnown RBP20.57■□□□□ 0.88
ABCF3-217ENST00000489719 NAP1L2Q9ULW6 460 aaPredicted RBP20.57■□□□□ 0.88
ABCF3-217ENST00000489719 CASTP20810 708 aaKnown RBP20.56■□□□□ 0.88
ABCF3-217ENST00000489719 LAMC2Q13753 1193 aa20.56■□□□□ 0.88
ABCF3-217ENST00000489719 RTN1Q16799 776 aa20.56■□□□□ 0.88
ABCF3-217ENST00000489719 MFSD5Q6N075 450 aa20.56■□□□□ 0.88
ABCF3-217ENST00000489719 BLOC1S2Q6QNY1 142 aa20.56■□□□□ 0.88
ABCF3-217ENST00000489719 DHX37Q8IY37 1157 aaKnown RBP20.56■□□□□ 0.88
ABCF3-217ENST00000489719 TRPV6Q9H1D0 765 aa20.56■□□□□ 0.88
ABCF3-217ENST00000489719 PSTPIP2Q9H939 334 aa20.56■□□□□ 0.88
ABCF3-217ENST00000489719 BRPF3Q9ULD4 1205 aa20.56■□□□□ 0.88
ABCF3-217ENST00000489719 SNX14Q9Y5W7 946 aa20.56■□□□□ 0.88
ABCF3-217ENST00000489719 RANBP2P49792 3224 aaKnown RBP20.55■□□□□ 0.88
ABCF3-217ENST00000489719 KLF18A0A0U1RQI7 1052 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 hCG_1642624A0A1W2PR95 340 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 SUPT20HL2P0C7V6 817 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 TGFB3P10600 412 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 PSMA5P28066 241 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 CHMP4BP1P59074 171 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 ARHGAP1Q07960 439 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 FAM47CQ5HY64 1035 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 GPR153Q6NV75 609 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 TMEM199Q8N511 208 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 PPP1R12CQ9BZL4 782 aa20.55■□□□□ 0.88
ABCF3-217ENST00000489719 DGKDQ16760 1214 aa20.54■□□□□ 0.88
ABCF3-217ENST00000489719 NBPF20Q3BBV1 942 aa20.54■□□□□ 0.88
ABCF3-217ENST00000489719 C9orf50Q5SZB4 431 aa20.54■□□□□ 0.88
ABCF3-217ENST00000489719 USP17L6PQ6QN14 398 aa20.54■□□□□ 0.88
ABCF3-217ENST00000489719 ALDH8A1Q9H2A2 487 aaPredicted RBP20.54■□□□□ 0.88
ABCF3-217ENST00000489719 GOLGA8AA7E2F4 631 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 GOLGA8BA8MQT2 603 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 PIK3CDO00329 1044 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 EPB41L2O43491 1005 aaKnown RBP20.53■□□□□ 0.88
ABCF3-217ENST00000489719 B4GALT4O60513 344 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 STAM2O75886 525 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 CPA1P15085 419 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 CYP2C18P33260 490 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 PPIGQ13427 754 aaKnown RBP eCLIP20.53■□□□□ 0.882e-7■■■■□ 23.1
ABCF3-217ENST00000489719 GNPTABQ3T906 1256 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 NFRKBQ6P4R8 1299 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 Q6ZUG5 572 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 HEATR3Q7Z4Q2 680 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 IL31RAQ8NI17 732 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 EMID1Q96A84 441 aaPredicted RBP20.53■□□□□ 0.88
ABCF3-217ENST00000489719 ZFP91Q96JP5 570 aaPredicted RBP20.53■□□□□ 0.88
ABCF3-217ENST00000489719 HIPK3Q9H422 1215 aa20.53■□□□□ 0.88
ABCF3-217ENST00000489719 V9GY48 417 aaPredicted RBP20.53■□□□□ 0.88
ABCF3-217ENST00000489719 CCDC196A0A1B0GTZ2 297 aa20.52■□□□□ 0.88
ABCF3-217ENST00000489719 MEIS2O14770 477 aa20.52■□□□□ 0.88
ABCF3-217ENST00000489719 RGS20O76081 388 aa20.52■□□□□ 0.88
ABCF3-217ENST00000489719 MMP3P08254 477 aa20.52■□□□□ 0.88
ABCF3-217ENST00000489719 EPHB4P54760 987 aa20.52■□□□□ 0.88
ABCF3-217ENST00000489719 PTPN11Q06124 597 aaPredicted RBP20.52■□□□□ 0.88
ABCF3-217ENST00000489719 MLXIPQ9HAP2 919 aa20.52■□□□□ 0.88
ABCF3-217ENST00000489719 RTEL1Q9NZ71 1219 aa20.52■□□□□ 0.88
ABCF3-217ENST00000489719 LCTP09848 1927 aa20.52■□□□□ 0.88
ABCF3-217ENST00000489719 RCAN1P53805 252 aa20.51■□□□□ 0.87
ABCF3-217ENST00000489719 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
ABCF3-217ENST00000489719 CELF3Q5SZQ8 465 aaKnown RBP20.51■□□□□ 0.87
ABCF3-217ENST00000489719 MYSM1Q5VVJ2 828 aa20.51■□□□□ 0.87
ABCF3-217ENST00000489719 XRRA1Q6P2D8 792 aa20.51■□□□□ 0.87
ABCF3-217ENST00000489719 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
ABCF3-217ENST00000489719 RNPC3Q96LT9 517 aaKnown RBP20.51■□□□□ 0.87
ABCF3-217ENST00000489719 PPFIA4O75335 1185 aa20.5■□□□□ 0.87
ABCF3-217ENST00000489719 GGPS1O95749 300 aa20.5■□□□□ 0.87
ABCF3-217ENST00000489719 CSF2RAP15509 400 aa20.5■□□□□ 0.87
ABCF3-217ENST00000489719 RPS6KB1P23443 525 aa20.5■□□□□ 0.87
ABCF3-217ENST00000489719 METAP2P50579 478 aaKnown RBP eCLIP20.5■□□□□ 0.87
ABCF3-217ENST00000489719 MRPS9P82933 396 aaKnown RBP20.5■□□□□ 0.87
ABCF3-217ENST00000489719 BRF1Q92994 677 aa20.5■□□□□ 0.87
ABCF3-217ENST00000489719 SPATA33Q96N06 139 aa20.5■□□□□ 0.87
ABCF3-217ENST00000489719 USP26Q9BXU7 913 aa20.5■□□□□ 0.87
ABCF3-217ENST00000489719 TRMT13Q9NUP7 481 aaKnown RBP20.5■□□□□ 0.87
ABCF3-217ENST00000489719 NOD1Q9Y239 953 aa20.5■□□□□ 0.87
ABCF3-217ENST00000489719 BAZ2BQ9UIF8 2168 aaKnown RBP20.49■□□□□ 0.87
ABCF3-217ENST00000489719 SPDYE3A6NKU9 549 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 SORBS3O60504 671 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 ADD1P35611 737 aaKnown RBP20.49■□□□□ 0.87
ABCF3-217ENST00000489719 CCL23P55773 120 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 SP2Q02086 613 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 NEDD9Q14511 834 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 PCNX4Q63HM2 1172 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 NLRX1Q86UT6 975 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 DEFB123Q8N688 67 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 GPKOWQ92917 476 aaPredicted RBP eCLIP20.49■□□□□ 0.87
ABCF3-217ENST00000489719 NOC4LQ9BVI4 516 aaKnown RBP20.49■□□□□ 0.87
ABCF3-217ENST00000489719 FRMPD4Q14CM0 1322 aa20.49■□□□□ 0.87
ABCF3-217ENST00000489719 LRRC37A2A6NM11 1700 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 SPATA31C2B4DYI2 1134 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 CYP2C9P11712 490 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 CDC27P30260 824 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 ICAM3P32942 547 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 NAPAP54920 295 aa20.48■□□□□ 0.87
ABCF3-217ENST00000489719 RPUSD2Q8IZ73 545 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms