RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ANKRD40Q6AI12 368 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 ARHGAP27Q6ZUM4 889 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 MBOAT7Q96N66 472 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 PNMA5Q96PV4 448 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 ERGIC2Q96RQ1 377 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 WDR24Q96S15 920 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 DESI2Q9BSY9 194 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 FAM198AQ9UFP1 575 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 PCDHA1Q9Y5I3 950 aa16.68■□□□□ 0.26
COL9A1-208ENST00000489611 KRT83P78385 493 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 CDK17Q00537 523 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 ICA1Q05084 483 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 TBC1D8BQ0IIM8 1120 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 NAA30Q147X3 362 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-208ENST00000489611 MTF1Q14872 753 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 ERCC6LQ2NKX8 1250 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 TTBK2Q6IQ55 1244 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 RSBN1LQ6PCB5 846 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-208ENST00000489611 KCTD1Q719H9 257 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
COL9A1-208ENST00000489611 CCDC170Q8IYT3 715 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 GPR161Q8N6U8 529 aaKnown RBP16.67■□□□□ 0.26
COL9A1-208ENST00000489611 UBE2Q2Q8WVN8 375 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
COL9A1-208ENST00000489611 TSG101Q99816 390 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 AMNQ9BXJ7 453 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 MRPL44Q9H9J2 332 aaKnown RBP16.67■□□□□ 0.26
COL9A1-208ENST00000489611 PSME4Q14997 1843 aa16.67■□□□□ 0.26
COL9A1-208ENST00000489611 MYMKA6NI61 221 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 EDIL3O43854 480 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 VIL1P09327 827 aaKnown RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 MTIF2P46199 727 aaKnown RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 ZBED6P86452 979 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 MEA1Q16626 185 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 ABCB5Q2M3G0 1257 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 QRICH1Q2TAL8 776 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 CLEC10AQ8IUN9 316 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 SMAP1Q8IYB5 467 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 EHBP1Q8NDI1 1231 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 EPN1Q9Y6I3 576 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 TTC26A0AVF1 554 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 CTAGE9A4FU28 777 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 DDTLA6NHG4 134 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 TRIM21P19474 475 aaKnown RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 PRELPP51888 382 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 PPP2R3AQ06190 1150 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 CXCL9Q07325 125 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 EHHADHQ08426 723 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 MCM6Q14566 821 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 CDC37Q16543 378 aaPredicted RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 CEP112Q8N8E3 955 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 KIAA0895Q8NCT3 520 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 HAS1Q92839 578 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 NOC4LQ9BVI4 516 aaKnown RBP16.66■□□□□ 0.26
COL9A1-208ENST00000489611 HAUS4Q9H6D7 363 aa16.66■□□□□ 0.26
COL9A1-208ENST00000489611 PES1O00541 588 aaKnown RBP16.65■□□□□ 0.26
COL9A1-208ENST00000489611 ATP8B1O43520 1251 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 COBLO75128 1261 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 NDUFA10O95299 355 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 IPO7O95373 1038 aaKnown RBP16.65■□□□□ 0.26
COL9A1-208ENST00000489611 CYLC1P35663 651 aaPredicted RBP16.65■□□□□ 0.26
COL9A1-208ENST00000489611 SLC16A2P36021 539 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 CACNB3P54284 484 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 ERVK-24P63145 666 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 UBE2SQ16763 222 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 HAUS3Q68CZ6 603 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 FBXO38Q6PIJ6 1188 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 JDP2Q8WYK2 163 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 RABGGTAQ92696 567 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 CARD6Q9BX69 1037 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 LZTFL1Q9NQ48 299 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 UTRNP46939 3433 aa16.65■□□□□ 0.26
COL9A1-208ENST00000489611 POTEMA6NI47 508 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 FANCGO15287 622 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 FCER1AP12319 257 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 TCP10Q12799 353 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 RBM26Q5T8P6 1007 aaKnown RBP16.64■□□□□ 0.26
COL9A1-208ENST00000489611 BTNL9Q6UXG8 535 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 ZFPM1Q8IX07 1006 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 DDX12PQ92771 950 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 GMLQ99445 158 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 TTYH3Q9C0H2 523 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 TMOD2Q9NZR1 351 aa16.64■□□□□ 0.26
COL9A1-208ENST00000489611 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.64■□□□□ 0.26
COL9A1-208ENST00000489611 V9GYY5 206 aaPredicted RBP16.64■□□□□ 0.26
COL9A1-208ENST00000489611 B4DLN1 442 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 F5H6K3 240 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 POTEB2H3BUK9 544 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 MMP14P50281 582 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 KLRC3Q07444 240 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 BMS1Q14692 1282 aaKnown RBP16.64■□□□□ 0.25
COL9A1-208ENST00000489611 ERMNQ8TAM6 284 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 GOLGA1Q92805 767 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 ANO3Q9BYT9 981 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 EDEM3Q9BZQ6 932 aa16.64■□□□□ 0.25
COL9A1-208ENST00000489611 CDC23Q9UJX2 597 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms