RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 CHMP4BP1P59074 171 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 PTGISQ16647 500 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 TRAF7Q6Q0C0 670 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
CSF3R-213ENST00000489551 CHST3Q7LGC8 479 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 SESTD1Q86VW0 696 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 ZSCAN10Q96SZ4 725 aaPredicted RBP11.78□□□□□ -0.52
CSF3R-213ENST00000489551 UHRF1Q96T88 793 aaPredicted RBP11.78□□□□□ -0.52
CSF3R-213ENST00000489551 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
CSF3R-213ENST00000489551 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
CSF3R-213ENST00000489551 DDX41Q9UJV9 622 aaKnown RBP11.78□□□□□ -0.52
CSF3R-213ENST00000489551 PNMA2Q9UL42 364 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 ABCB11O95342 1321 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 NLRC5Q86WI3 1866 aa11.78□□□□□ -0.52
CSF3R-213ENST00000489551 HAS3O00219 553 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 NBNO60934 754 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 GH1P01241 217 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.53
CSF3R-213ENST00000489551 DEFB103AP81534 67 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 ZNF200P98182 395 aaPredicted RBP11.77□□□□□ -0.53
CSF3R-213ENST00000489551 NUCB1Q02818 461 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 RBL2Q08999 1139 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 TRIM71Q2Q1W2 868 aaKnown RBP11.77□□□□□ -0.53
CSF3R-213ENST00000489551 BRDTQ58F21 947 aaPredicted RBP11.77□□□□□ -0.53
CSF3R-213ENST00000489551 CHD1LQ86WJ1 897 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 RETREG2Q8NC44 543 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 PHOSPHO2Q8TCD6 241 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 NSUN6Q8TEA1 469 aaKnown RBP11.77□□□□□ -0.53
CSF3R-213ENST00000489551 SLC9A7Q96T83 725 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 RMDN3Q96TC7 470 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 FTOQ9C0B1 505 aaKnown RBP eCLIP11.77□□□□□ -0.53
CSF3R-213ENST00000489551 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 VAT1LQ9HCJ6 419 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 HDAC6Q9UBN7 1215 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 RAD50Q92878 1312 aa11.77□□□□□ -0.53
CSF3R-213ENST00000489551 KAT6AQ92794 2004 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 CXCL10P02778 98 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 NR3C2P08235 984 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 ACTN1P12814 892 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 EIF2AK2P19525 551 aaKnown RBP11.76□□□□□ -0.53
CSF3R-213ENST00000489551 SP2Q02086 613 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 GHRHRQ02643 423 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 GRB10Q13322 594 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 BFSP2Q13515 415 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 MBTPS1Q14703 1052 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 SEC23AQ15436 765 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 STXBP2Q15833 593 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 ASPRV1Q53RT3 343 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 CYB5R4Q7L1T6 521 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 FBXO11Q86XK2 927 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 ARNTL2Q8WYA1 636 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 GPKOWQ92917 476 aaPredicted RBP eCLIP11.76□□□□□ -0.53
CSF3R-213ENST00000489551 MTMR8Q96EF0 704 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
CSF3R-213ENST00000489551 IWS1Q96ST2 819 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 MPHOSPH6Q99547 160 aaKnown RBP11.76□□□□□ -0.53
CSF3R-213ENST00000489551 DSCC1Q9BVC3 393 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 MAF1Q9H063 256 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 BCAS3Q9H6U6 928 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 PXMP2Q9NR77 195 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 GTF2IRD1Q9UHL9 959 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
CSF3R-213ENST00000489551 ZNF286BP0CG31 522 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 CKBP12277 381 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 HOXD8P13378 290 aaPredicted RBP11.75□□□□□ -0.53
CSF3R-213ENST00000489551 SELPP16109 830 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 PSEN2P49810 448 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 HSD17B4P51659 736 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 MFAP1P55081 439 aaKnown RBP11.75□□□□□ -0.53
CSF3R-213ENST00000489551 IQCA1Q86XH1 822 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 IL31RAQ8NI17 732 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 CAGE1Q8TC20 777 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 AFAP1L1Q8TED9 768 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 EMID1Q96A84 441 aaPredicted RBP11.75□□□□□ -0.53
CSF3R-213ENST00000489551 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 OSBPL7Q9BZF2 842 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 SENP2Q9HC62 589 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 MRPL11Q9Y3B7 192 aaKnown RBP11.75□□□□□ -0.53
CSF3R-213ENST00000489551 TAF6LQ9Y6J9 622 aa11.75□□□□□ -0.53
CSF3R-213ENST00000489551 LOXHD1Q8IVV2 1947 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 MYO7AQ13402 2215 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 B4DLN1 442 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 TLL1O43897 1013 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 SORBS3O60504 671 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
CSF3R-213ENST00000489551 BAIAP3O94812 1187 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 F2P00734 622 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 CFBP00751 764 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 PARP1P09874 1014 aaKnown RBP11.74□□□□□ -0.53
CSF3R-213ENST00000489551 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
CSF3R-213ENST00000489551 HOXA13P31271 388 aaPredicted RBP11.74□□□□□ -0.53
CSF3R-213ENST00000489551 MRPL12P52815 198 aaKnown RBP11.74□□□□□ -0.53
CSF3R-213ENST00000489551 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
CSF3R-213ENST00000489551 DGKDQ16760 1214 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 KIAA0753Q2KHM9 967 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 HSDL1Q3SXM5 330 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 CCDC178Q5BJE1 867 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 ZNF618Q5T7W0 954 aa11.74□□□□□ -0.53
CSF3R-213ENST00000489551 ARHGEF16Q5VV41 709 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms