RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 COL20A1Q9P218 1284 aa15.59■□□□□ 0.09
LMO4-203ENST00000489303 NAP1L2Q9ULW6 460 aaPredicted RBP15.59■□□□□ 0.09
LMO4-203ENST00000489303 RBAK-RBAKDNI3L0D1 243 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 OPLAHO14841 1288 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 TLR3O15455 904 aaKnown RBP15.58■□□□□ 0.08
LMO4-203ENST00000489303 EIF3JO75822 258 aaKnown RBP15.58■□□□□ 0.08
LMO4-203ENST00000489303 NR3C2P08235 984 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 ACRP10323 421 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 HOXA13P31271 388 aaPredicted RBP15.58■□□□□ 0.08
LMO4-203ENST00000489303 FPGSQ05932 587 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 COL9A3Q14050 684 aaPredicted RBP15.58■□□□□ 0.08
LMO4-203ENST00000489303 RTN1Q16799 776 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 APOA5Q6Q788 366 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 CXCL17Q6UXB2 119 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 SEPT14Q6ZU15 432 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 TMTC3Q6ZXV5 915 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 FCHSD1Q86WN1 690 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 CCDC82Q8N4S0 544 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 SMARCC2Q8TAQ2 1214 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 TOX2Q96NM4 488 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.58■□□□□ 0.08
LMO4-203ENST00000489303 PPP1R12CQ9BZL4 782 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 POLR3EQ9NVU0 708 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
LMO4-203ENST00000489303 KLF18A0A0U1RQI7 1052 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 GOLGA8AA7E2F4 631 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 GOLGA8BA8MQT2 603 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 GRXCR1A8MXD5 290 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 ARVCFO00192 962 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 EIF5BO60841 1220 aaKnown RBP15.57■□□□□ 0.08
LMO4-203ENST00000489303 TIMP1P01033 207 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 MYCLP12524 364 aaPredicted RBP15.57■□□□□ 0.08
LMO4-203ENST00000489303 RCAN1P53805 252 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 SMAD3P84022 425 aaKnown RBP15.57■□□□□ 0.08
LMO4-203ENST00000489303 FAM126BQ8IXS8 530 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 CMTR1Q8N1G2 835 aaKnown RBP15.57■□□□□ 0.08
LMO4-203ENST00000489303 PDCD2LQ9BRP1 358 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 GRIN2DO15399 1336 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 UMODL1Q5DID0 1318 aa15.57■□□□□ 0.08
LMO4-203ENST00000489303 CCDC196A0A1B0GTZ2 297 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 KPNA6O60684 536 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 CSF2RAP15509 400 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 CCND2P30279 289 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 PSMC6P62333 389 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 KCNV1Q6PIU1 500 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 Q6ZUG5 572 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.56■□□□□ 0.08
LMO4-203ENST00000489303 PPP1R13LQ8WUF5 828 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 COL25A1Q9BXS0 654 aaPredicted RBP15.56■□□□□ 0.08
LMO4-203ENST00000489303 BRPF3Q9ULD4 1205 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 MRVI1Q9Y6F6 885 aa15.56■□□□□ 0.08
LMO4-203ENST00000489303 PRUNE2Q8WUY3 3088 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 GH1P01241 217 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 MYL3P08590 195 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 CASTP20810 708 aaKnown RBP15.55■□□□□ 0.08
LMO4-203ENST00000489303 RPS6KB1P23443 525 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 CYP2C18P33260 490 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 PBX2P40425 430 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 METAP2P50579 478 aaKnown RBP eCLIP15.55■□□□□ 0.08
LMO4-203ENST00000489303 ITGA7Q13683 1181 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 GRIN2CQ14957 1233 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 PGM5Q15124 567 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 TMEM240Q5SV17 173 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 MFSD5Q6N075 450 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 HEATR3Q7Z4Q2 680 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 PSTPIP2Q9H939 334 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 VCANP13611 3396 aa15.55■□□□□ 0.08
LMO4-203ENST00000489303 CD4P01730 458 aa15.54■□□□□ 0.08
LMO4-203ENST00000489303 CPA1P15085 419 aa15.54■□□□□ 0.08
LMO4-203ENST00000489303 LY6KQ17RY6 165 aa15.54■□□□□ 0.08
LMO4-203ENST00000489303 VSIG10LQ86VR7 867 aa15.54■□□□□ 0.08
LMO4-203ENST00000489303 MAFAQ8NHW3 353 aaPredicted RBP15.54■□□□□ 0.08
LMO4-203ENST00000489303 COPS5Q92905 334 aa15.54■□□□□ 0.08
LMO4-203ENST00000489303 BRF1Q92994 677 aa15.54■□□□□ 0.08
LMO4-203ENST00000489303 MTG1Q9BT17 334 aaPredicted RBP15.54■□□□□ 0.08
LMO4-203ENST00000489303 USP26Q9BXU7 913 aa15.54■□□□□ 0.08
LMO4-203ENST00000489303 TRPV6Q9H1D0 765 aa15.54■□□□□ 0.08
LMO4-203ENST00000489303 MYH6P13533 1939 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 hCG_1642624A0A1W2PR95 340 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 A6NJR5 290 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 hCG_1984214I3L0E3 225 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 PIK3CDO00329 1044 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 STAM2O75886 525 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 ARIH2O95376 493 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 APOBRQ0VD83 1088 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 GNPTABQ3T906 1256 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 CCDC62Q6P9F0 684 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 ZNF365Q70YC5 407 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 ZNF713Q8N859 430 aaPredicted RBP15.53■□□□□ 0.08
LMO4-203ENST00000489303 SLC43A3Q8NBI5 491 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 DDX41Q9UJV9 622 aaKnown RBP15.53■□□□□ 0.08
LMO4-203ENST00000489303 CYP46A1Q9Y6A2 500 aa15.53■□□□□ 0.08
LMO4-203ENST00000489303 TGFB3P10600 412 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 DNAJB2P25686 324 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 PURAQ00577 322 aaKnown RBP15.52■□□□□ 0.08
LMO4-203ENST00000489303 LAMC2Q13753 1193 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 XRRA1Q6P2D8 792 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 USP17L6PQ6QN14 398 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 RUFY3Q7L099 469 aa15.52■□□□□ 0.08
LMO4-203ENST00000489303 DHX37Q8IY37 1157 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms