RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 HAUS1Q96CS2 278 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 CUEDC2Q9H467 287 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 CCPG1Q9ULG6 757 aa19.17■□□□□ 0.66
NPHP4-209ENST00000489180 ZNF521Q96K83 1311 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 PSMC2P35998 433 aaKnown RBP19.16■□□□□ 0.66
NPHP4-209ENST00000489180 TRIP13Q15645 432 aaPredicted RBP19.16■□□□□ 0.66
NPHP4-209ENST00000489180 FAM186BQ8IYM0 893 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 PGRMC1O00264 195 aaKnown RBP19.16■□□□□ 0.66
NPHP4-209ENST00000489180 ABL1P00519 1130 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 RBBP5Q15291 538 aaKnown RBP19.16■□□□□ 0.66
NPHP4-209ENST00000489180 USPL1Q5W0Q7 1092 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 MCTP2Q6DN12 878 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 COA7Q96BR5 231 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 MAPK4P31152 587 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 NT5C1BQ96P26 610 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 AP1M1Q9BXS5 423 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 GPR108Q9NPR9 543 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 PCDHA13Q9Y5I0 950 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 HNRNPDLO14979 420 aaKnown RBP19.16■□□□□ 0.66
NPHP4-209ENST00000489180 ASAP1Q9ULH1 1129 aa19.16■□□□□ 0.66
NPHP4-209ENST00000489180 RNF8O76064 485 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 INHBAP08476 426 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 COG7P83436 770 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 ABCB5Q2M3G0 1257 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 SGO2Q562F6 1265 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 ENOX1Q8TC92 643 aaKnown RBP19.15■□□□□ 0.66
NPHP4-209ENST00000489180 ZSWIM5Q9P217 1185 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 TRIM37O94972 964 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 NDUFA10O95299 355 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 IRX4P78413 519 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 GDAP1Q8TB36 358 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 GJB4Q9NTQ9 266 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 HESX1Q9UBX0 185 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 CTNND1O60716 968 aaKnown RBP19.15■□□□□ 0.66
NPHP4-209ENST00000489180 DYNLT1P63172 113 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 DBN1Q16643 649 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 TCP11X2Q5H9J9 407 aa19.15■□□□□ 0.66
NPHP4-209ENST00000489180 HOOK2Q96ED9 719 aa19.14■□□□□ 0.66
NPHP4-209ENST00000489180 ZNF577Q9BSK1 485 aa19.14■□□□□ 0.66
NPHP4-209ENST00000489180 SEPT9Q9UHD8 586 aaPredicted RBP19.14■□□□□ 0.66
NPHP4-209ENST00000489180 MAGED2Q9UNF1 606 aaPredicted RBP19.14■□□□□ 0.66
NPHP4-209ENST00000489180 LTKP29376 864 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 CCDC93Q567U6 631 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 SCYL3Q8IZE3 742 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 USH1CQ9Y6N9 552 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 ERVK-7P63135 1459 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 CASP8Q14790 479 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 RINT1Q6NUQ1 792 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 RETREG2Q8NC44 543 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 MYCBPQ99417 103 aaPredicted RBP19.14■□□□□ 0.65
NPHP4-209ENST00000489180 GCNT4Q9P109 453 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 KMT5BQ4FZB7 885 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 TOGARAM2Q6ZUX3 1019 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 AK8Q96MA6 479 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 RUNDC3BQ96NL0 473 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 NOVA2Q9UNW9 492 aaKnown RBP19.14■□□□□ 0.65
NPHP4-209ENST00000489180 ATP10AO60312 1499 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 DISP1Q96F81 1524 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 PCP11498 1178 aaKnown RBP19.14■□□□□ 0.65
NPHP4-209ENST00000489180 POLR2BP30876 1174 aaKnown RBP19.14■□□□□ 0.65
NPHP4-209ENST00000489180 SLFNL1Q499Z3 407 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 MCF2L2Q86YR7 1114 aa19.14■□□□□ 0.65
NPHP4-209ENST00000489180 PLCG1P19174 1290 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 MMEL1Q495T6 779 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 EFCAB13Q8IY85 973 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 ANKRD35Q8N283 1001 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 PI4K2BQ8TCG2 481 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 DYNLL2Q96FJ2 89 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 AMNQ9BXJ7 453 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 SRPRBQ9Y5M8 271 aaKnown RBP19.13■□□□□ 0.65
NPHP4-209ENST00000489180 SART1O43290 800 aaKnown RBP19.13■□□□□ 0.65
NPHP4-209ENST00000489180 ECEL1O95672 775 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 ECE1P42892 770 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 ARHGAP4P98171 946 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 PDE1BQ01064 536 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 RASIP1Q5U651 963 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 JADE1Q6IE81 842 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 ANAPC5Q9UJX4 755 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 CRKLP46109 303 aaKnown RBP19.13■□□□□ 0.65
NPHP4-209ENST00000489180 AOC3Q16853 763 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 KRT26Q7Z3Y9 468 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 YEATS2Q9ULM3 1422 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 NECTIN1Q15223 517 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 VCX3AQ9NNX9 186 aa19.13■□□□□ 0.65
NPHP4-209ENST00000489180 UBE2TQ9NPD8 197 aaPredicted RBP19.13■□□□□ 0.65
NPHP4-209ENST00000489180 UBE2SQ16763 222 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 AS3MTQ9HBK9 375 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 KDM5CP41229 1560 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 CCDC151A5D8V7 595 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 A6NJR5 290 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 GOLGA8SH3BPF8 625 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 USP17L2Q6R6M4 530 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 TMEM2Q9UHN6 1383 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 SPDYE16A6NNV3 312 aaPredicted RBP19.12■□□□□ 0.65
NPHP4-209ENST00000489180 SASH1O94885 1247 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 KIF11P52732 1056 aa19.12■□□□□ 0.65
NPHP4-209ENST00000489180 FKBP3Q00688 224 aaKnown RBP19.12■□□□□ 0.65
NPHP4-209ENST00000489180 PTPN12Q05209 780 aaKnown RBP19.12■□□□□ 0.65
NPHP4-209ENST00000489180 SPDYE2Q495Y8 402 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms