RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 LZTS2Q9BRK4 669 aa14.54□□□□□ -0.08
SRRM1-216ENST00000489130 UMODL1Q5DID0 1318 aa14.54□□□□□ -0.08
SRRM1-216ENST00000489130 SCN10AQ9Y5Y9 1956 aa14.54□□□□□ -0.08
SRRM1-216ENST00000489130 CDH23Q9H251 3354 aa14.54□□□□□ -0.08
SRRM1-216ENST00000489130 CCDC69A6NI79 296 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 PTPN11Q06124 597 aaPredicted RBP14.53□□□□□ -0.08
SRRM1-216ENST00000489130 PGM5Q15124 567 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 NBPF20Q3BBV1 942 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 RASIP1Q5U651 963 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 RNF20Q5VTR2 975 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 NFXL1Q6ZNB6 911 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 VSIG10LQ86VR7 867 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 GUCD1Q96NT3 240 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 IL23AQ9NPF7 189 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 TRMT13Q9NUP7 481 aaKnown RBP14.53□□□□□ -0.08
SRRM1-216ENST00000489130 MRVI1Q9Y6F6 885 aa14.53□□□□□ -0.08
SRRM1-216ENST00000489130 FRMPD4Q14CM0 1322 aa14.52□□□□□ -0.08
SRRM1-216ENST00000489130 TMEM265A0A087WTH1 108 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 CDC45O75419 566 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 RGS20O76081 388 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 CALM1P0DP23 149 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 CALM2P0DP24 149 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 CALM3P0DP25 149 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 ACRP10323 421 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 GNAQP50148 359 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 IL31RAQ8NI17 732 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 RRP36Q96EU6 259 aaKnown RBP14.52□□□□□ -0.09
SRRM1-216ENST00000489130 WNT8AQ9H1J5 351 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 KIAA1217Q5T5P2 1943 aa14.52□□□□□ -0.09
SRRM1-216ENST00000489130 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.51□□□□□ -0.09
SRRM1-216ENST00000489130 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.51□□□□□ -0.09
SRRM1-216ENST00000489130 PLEKHA8P1O95397 391 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 MYCLP12524 364 aaPredicted RBP14.51□□□□□ -0.09
SRRM1-216ENST00000489130 CCND2P30279 289 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 CCL23P55773 120 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 LAMC2Q13753 1193 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 DGKDQ16760 1214 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 TSGA10IPQ3SY00 556 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 FAM47CQ5HY64 1035 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 KCNV1Q6PIU1 500 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 ZNF365Q70YC5 407 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 SGMS1Q86VZ5 419 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 FCHSD1Q86WN1 690 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 SRBD1Q8N5C6 995 aaKnown RBP14.51□□□□□ -0.09
SRRM1-216ENST00000489130 PPTC7Q8NI37 304 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 PIBF1Q8WXW3 757 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 LRRC2Q9BYS8 371 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 SEMA6BQ9H3T3 888 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 SEC63Q9UGP8 760 aaKnown RBP14.51□□□□□ -0.09
SRRM1-216ENST00000489130 SLC12A7Q9Y666 1083 aa14.51□□□□□ -0.09
SRRM1-216ENST00000489130 PIK3CDO00329 1044 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 TGFB3P10600 412 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 CYP2C9P11712 490 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 HOXD8P13378 290 aaPredicted RBP14.5□□□□□ -0.09
SRRM1-216ENST00000489130 RXRAP19793 462 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 CASTP20810 708 aaKnown RBP14.5□□□□□ -0.09
SRRM1-216ENST00000489130 SESTD1Q86VW0 696 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 HERVK_113Q902F9 699 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 KAT2BQ92831 832 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 CCDC136Q96JN2 1154 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 FAM161BQ96MY7 647 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 NEK1Q96PY6 1258 aa14.5□□□□□ -0.09
SRRM1-216ENST00000489130 TTYH1Q9H313 450 aaPredicted RBP14.5□□□□□ -0.09
SRRM1-216ENST00000489130 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
SRRM1-216ENST00000489130 STAM2O75886 525 aa14.49□□□□□ -0.09
SRRM1-216ENST00000489130 UBA1P22314 1058 aaKnown RBP14.49□□□□□ -0.09
SRRM1-216ENST00000489130 EXOSC10Q01780 885 aaKnown RBP14.49□□□□□ -0.09
SRRM1-216ENST00000489130 CELF3Q5SZQ8 465 aaKnown RBP14.49□□□□□ -0.09
SRRM1-216ENST00000489130 MYSM1Q5VVJ2 828 aa14.49□□□□□ -0.09
SRRM1-216ENST00000489130 TMTC3Q6ZXV5 915 aa14.49□□□□□ -0.09
SRRM1-216ENST00000489130 DHX37Q8IY37 1157 aaKnown RBP14.49□□□□□ -0.09
SRRM1-216ENST00000489130 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
SRRM1-216ENST00000489130 CMTR1Q8N1G2 835 aaKnown RBP14.49□□□□□ -0.09
SRRM1-216ENST00000489130 FANCBQ8NB91 859 aa14.49□□□□□ -0.09
SRRM1-216ENST00000489130 PPP1R13LQ8WUF5 828 aa14.49□□□□□ -0.09
SRRM1-216ENST00000489130 VWCEQ96DN2 955 aa14.49□□□□□ -0.09
SRRM1-216ENST00000489130 INPP4AQ96PE3 977 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-216ENST00000489130 BAZ2BQ9UIF8 2168 aaKnown RBP14.49□□□□□ -0.09
SRRM1-216ENST00000489130 MEIS2O14770 477 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 F2P00734 622 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 FGBP02675 491 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 PFKMP08237 780 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 DNAJB2P25686 324 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 MRPS9P82933 396 aaKnown RBP14.48□□□□□ -0.09
SRRM1-216ENST00000489130 SP2Q02086 613 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 KRT32Q14532 448 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 ADCK5Q3MIX3 580 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 APOA5Q6Q788 366 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 DHX32Q7L7V1 743 aaKnown RBP14.48□□□□□ -0.09
SRRM1-216ENST00000489130 MICU3Q86XE3 530 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 RAB11FIP4Q86YS3 637 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 RPUSD2Q8IZ73 545 aaKnown RBP14.48□□□□□ -0.09
SRRM1-216ENST00000489130 SCLYQ96I15 445 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 CDX2Q99626 313 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-216ENST00000489130 KATNAL1Q9BW62 490 aa14.48□□□□□ -0.09
SRRM1-216ENST00000489130 MTIF3Q9H2K0 278 aaKnown RBP14.48□□□□□ -0.09
SRRM1-216ENST00000489130 CXXC1Q9P0U4 656 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-216ENST00000489130 HAS3O00219 553 aa14.47□□□□□ -0.09
SRRM1-216ENST00000489130 PPFIA4O75335 1185 aa14.47□□□□□ -0.09
SRRM1-216ENST00000489130 GGPS1O95749 300 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms