RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PSRC1Q6PGN9 363 aaPredicted RBP26.63■■□□□ 1.85
COL9A3-213ENST00000489045 TMTC2Q8N394 836 aa26.63■■□□□ 1.85
COL9A3-213ENST00000489045 IL31RAQ8NI17 732 aa26.63■■□□□ 1.85
COL9A3-213ENST00000489045 GUCD1Q96NT3 240 aa26.63■■□□□ 1.85
COL9A3-213ENST00000489045 IL23AQ9NPF7 189 aa26.63■■□□□ 1.85
COL9A3-213ENST00000489045 DDX41Q9UJV9 622 aaKnown RBP26.63■■□□□ 1.85
COL9A3-213ENST00000489045 TANC1Q9C0D5 1861 aa26.62■■□□□ 1.85
COL9A3-213ENST00000489045 SUPT20HL2P0C7V6 817 aa26.62■■□□□ 1.85
COL9A3-213ENST00000489045 CCL23P55773 120 aa26.62■■□□□ 1.85
COL9A3-213ENST00000489045 ZNF365Q70YC5 407 aa26.62■■□□□ 1.85
COL9A3-213ENST00000489045 FCHSD1Q86WN1 690 aa26.62■■□□□ 1.85
COL9A3-213ENST00000489045 LRRC2Q9BYS8 371 aa26.62■■□□□ 1.85
COL9A3-213ENST00000489045 WNT8AQ9H1J5 351 aa26.62■■□□□ 1.85
COL9A3-213ENST00000489045 SCN5AQ14524 2016 aa26.61■■□□□ 1.85
COL9A3-213ENST00000489045 RGS20O76081 388 aa26.61■■□□□ 1.85
COL9A3-213ENST00000489045 PLEKHA8P1O95397 391 aa26.61■■□□□ 1.85
COL9A3-213ENST00000489045 CYP2C9P11712 490 aa26.61■■□□□ 1.85
COL9A3-213ENST00000489045 RXRAP19793 462 aa26.61■■□□□ 1.85
COL9A3-213ENST00000489045 NFRKBQ6P4R8 1299 aa26.61■■□□□ 1.85
COL9A3-213ENST00000489045 RRP36Q96EU6 259 aaKnown RBP26.61■■□□□ 1.85
COL9A3-213ENST00000489045 GBF1Q92538 1859 aa26.6■■□□□ 1.85
COL9A3-213ENST00000489045 CDC45O75419 566 aa26.6■■□□□ 1.85
COL9A3-213ENST00000489045 LIFRP42702 1097 aa26.6■■□□□ 1.85
COL9A3-213ENST00000489045 CHMP4BP1P59074 171 aa26.6■■□□□ 1.85
COL9A3-213ENST00000489045 RASIP1Q5U651 963 aa26.6■■□□□ 1.85
COL9A3-213ENST00000489045 RNF20Q5VTR2 975 aa26.6■■□□□ 1.85
COL9A3-213ENST00000489045 VSIG10LQ86VR7 867 aa26.6■■□□□ 1.85
COL9A3-213ENST00000489045 LZTS2Q9BRK4 669 aa26.6■■□□□ 1.85
COL9A3-213ENST00000489045 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.59■■□□□ 1.85
COL9A3-213ENST00000489045 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.59■■□□□ 1.85
COL9A3-213ENST00000489045 SMARCA1P28370 1054 aa26.59■■□□□ 1.85
COL9A3-213ENST00000489045 CCND2P30279 289 aa26.59■■□□□ 1.85
COL9A3-213ENST00000489045 GNAQP50148 359 aa26.59■■□□□ 1.85
COL9A3-213ENST00000489045 RAB11FIP4Q86YS3 637 aa26.59■■□□□ 1.85
COL9A3-213ENST00000489045 SRBD1Q8N5C6 995 aaKnown RBP26.59■■□□□ 1.85
COL9A3-213ENST00000489045 EMID1Q96A84 441 aaPredicted RBP26.59■■□□□ 1.85
COL9A3-213ENST00000489045 TTYH1Q9H313 450 aaPredicted RBP26.59■■□□□ 1.85
COL9A3-213ENST00000489045 SEMA6BQ9H3T3 888 aa26.59■■□□□ 1.85
COL9A3-213ENST00000489045 SEC63Q9UGP8 760 aaKnown RBP26.59■■□□□ 1.85
COL9A3-213ENST00000489045 DOCK5Q9H7D0 1870 aa26.58■■□□□ 1.85
COL9A3-213ENST00000489045 CALM1P0DP23 149 aa26.58■■□□□ 1.85
COL9A3-213ENST00000489045 CALM2P0DP24 149 aa26.58■■□□□ 1.85
COL9A3-213ENST00000489045 CALM3P0DP25 149 aa26.58■■□□□ 1.85
COL9A3-213ENST00000489045 PTPN11Q06124 597 aaPredicted RBP26.58■■□□□ 1.85
COL9A3-213ENST00000489045 CMTR1Q8N1G2 835 aaKnown RBP26.58■■□□□ 1.85
COL9A3-213ENST00000489045 SCLYQ96I15 445 aa26.58■■□□□ 1.85
COL9A3-213ENST00000489045 CCDC136Q96JN2 1154 aa26.58■■□□□ 1.85
COL9A3-213ENST00000489045 ZFP91Q96JP5 570 aaPredicted RBP26.58■■□□□ 1.85
COL9A3-213ENST00000489045 SLC12A7Q9Y666 1083 aa26.58■■□□□ 1.85
COL9A3-213ENST00000489045 CASTP20810 708 aaKnown RBP26.57■■□□□ 1.84
COL9A3-213ENST00000489045 LAMC2Q13753 1193 aa26.57■■□□□ 1.84
COL9A3-213ENST00000489045 DGKDQ16760 1214 aa26.57■■□□□ 1.84
COL9A3-213ENST00000489045 KCNV1Q6PIU1 500 aa26.57■■□□□ 1.84
COL9A3-213ENST00000489045 DHX37Q8IY37 1157 aaKnown RBP26.57■■□□□ 1.84
COL9A3-213ENST00000489045 KAT2BQ92831 832 aa26.57■■□□□ 1.84
COL9A3-213ENST00000489045 FRMPD4Q14CM0 1322 aa26.57■■□□□ 1.84
COL9A3-213ENST00000489045 TRIP12Q14669 1992 aaPredicted RBP26.57■■□□□ 1.84
COL9A3-213ENST00000489045 FGBP02675 491 aa26.56■■□□□ 1.84
COL9A3-213ENST00000489045 DNAJB2P25686 324 aa26.56■■□□□ 1.84
COL9A3-213ENST00000489045 SGMS1Q86VZ5 419 aa26.56■■□□□ 1.84
COL9A3-213ENST00000489045 PPTC7Q8NI37 304 aa26.56■■□□□ 1.84
COL9A3-213ENST00000489045 HERVK_113Q902F9 699 aa26.56■■□□□ 1.84
COL9A3-213ENST00000489045 NEK1Q96PY6 1258 aa26.56■■□□□ 1.84
COL9A3-213ENST00000489045 TMEM265A0A087WTH1 108 aa26.55■■□□□ 1.84
COL9A3-213ENST00000489045 SORBS3O60504 671 aa26.55■■□□□ 1.84
COL9A3-213ENST00000489045 MICU3Q86XE3 530 aa26.55■■□□□ 1.84
COL9A3-213ENST00000489045 SLC17A8Q8NDX2 589 aa26.55■■□□□ 1.84
COL9A3-213ENST00000489045 GPKOWQ92917 476 aaPredicted RBP eCLIP26.55■■□□□ 1.84
COL9A3-213ENST00000489045 CDX2Q99626 313 aaPredicted RBP26.55■■□□□ 1.84
COL9A3-213ENST00000489045 CXXC1Q9P0U4 656 aaPredicted RBP26.55■■□□□ 1.84
COL9A3-213ENST00000489045 NOD1Q9Y239 953 aa26.55■■□□□ 1.84
COL9A3-213ENST00000489045 GRXCR1A8MXD5 290 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 GGPS1O95749 300 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 UBA1P22314 1058 aaKnown RBP26.54■■□□□ 1.84
COL9A3-213ENST00000489045 SP2Q02086 613 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 MYSM1Q5VVJ2 828 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 USP17L6PQ6QN14 398 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 OTOP2Q7RTS6 562 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 RASEFQ8IZ41 740 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 RPUSD2Q8IZ73 545 aaKnown RBP26.54■■□□□ 1.84
COL9A3-213ENST00000489045 SMARCC2Q8TAQ2 1214 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 MTIF3Q9H2K0 278 aaKnown RBP26.54■■□□□ 1.84
COL9A3-213ENST00000489045 CDH23Q9H251 3354 aa26.54■■□□□ 1.84
COL9A3-213ENST00000489045 ZNF286BP0CG31 522 aa26.53■■□□□ 1.84
COL9A3-213ENST00000489045 ADCK5Q3MIX3 580 aa26.53■■□□□ 1.84
COL9A3-213ENST00000489045 CELF3Q5SZQ8 465 aaKnown RBP26.53■■□□□ 1.84
COL9A3-213ENST00000489045 TMTC3Q6ZXV5 915 aa26.53■■□□□ 1.84
COL9A3-213ENST00000489045 SESTD1Q86VW0 696 aa26.53■■□□□ 1.84
COL9A3-213ENST00000489045 FANCBQ8NB91 859 aa26.53■■□□□ 1.84
COL9A3-213ENST00000489045 CUL5Q93034 780 aa26.53■■□□□ 1.84
COL9A3-213ENST00000489045 VWCEQ96DN2 955 aa26.53■■□□□ 1.84
COL9A3-213ENST00000489045 TCEANC2Q96MN5 208 aa26.53■■□□□ 1.84
COL9A3-213ENST00000489045 hCG_1642624A0A1W2PR95 340 aa26.52■■□□□ 1.84
COL9A3-213ENST00000489045 MEIS2O14770 477 aa26.52■■□□□ 1.84
COL9A3-213ENST00000489045 F2P00734 622 aa26.52■■□□□ 1.84
COL9A3-213ENST00000489045 TGFB3P10600 412 aa26.52■■□□□ 1.84
COL9A3-213ENST00000489045 PSEN2P49810 448 aa26.52■■□□□ 1.84
COL9A3-213ENST00000489045 MRPS9P82933 396 aaKnown RBP26.52■■□□□ 1.84
COL9A3-213ENST00000489045 PTGISQ16647 500 aa26.52■■□□□ 1.84
COL9A3-213ENST00000489045 HSDL1Q3SXM5 330 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms