RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 CTU1Q7Z7A3 348 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 SYNE4Q8N205 404 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 ZBTB38Q8NAP3 1195 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 SSU72Q9NP77 194 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 PPP1R9AQ9ULJ8 1098 aa10.03□□□□□ -0.8
TRAPPC12-221ENST00000489032 TMPRSS2O15393 492 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 RNGTTO60942 597 aaKnown RBP10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 NPR1P16066 1061 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 ZNF165P49910 485 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 PDE4BQ07343 736 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 SLC10A5Q5PT55 438 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 REC114Q7Z4M0 266 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 FBXO27Q8NI29 283 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 ARHGAP45Q92619 1136 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 RPGRQ92834 1020 aaKnown RBP10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 FRAT1Q92837 279 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 FAM89AQ96GI7 184 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 C9orf78Q9NZ63 289 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 CRIM1Q9NZV1 1036 aa10.02□□□□□ -0.81
TRAPPC12-221ENST00000489032 C1QTNF9BB2RNN3 333 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 BCAR3O75815 825 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 ALDH1L1O75891 902 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 PCCAP05165 728 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 IGKV5-2P06315 115 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 ALDH1B1P30837 517 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 GJA8P48165 433 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 CCT4P50991 539 aaKnown RBP10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 ETF1P62495 437 aaKnown RBP10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 COL9A2Q14055 689 aaPredicted RBP10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 UVSSAQ2YD98 709 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 BEND3Q5T5X7 828 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 CDC37L1Q7L3B6 337 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 FANCD2OSQ96PS1 177 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 LRRC3Q9BY71 257 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 ZNF408Q9H9D4 720 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 RCAN3Q9UKA8 241 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 HIF3AQ9Y2N7 669 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 AKAP11Q9UKA4 1901 aa10.01□□□□□ -0.81
TRAPPC12-221ENST00000489032 RIC1Q4ADV7 1423 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 GDF11O95390 407 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 TIAF1O95411 115 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 HCLS1P14317 486 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 DNAJA1P31689 397 aaKnown RBP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 CHRNA4P43681 627 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 GATA4P43694 442 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 PREPP48147 710 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 FXR1P51114 621 aaKnown RBP eCLIP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 ARID5AQ03989 594 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 GCKRQ14397 625 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 PPM1JQ5JR12 505 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 ATF7IPQ6VMQ6 1270 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 CD163Q86VB7 1156 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 TMEM151AQ8N4L1 468 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 GOLGA6L2Q8N9W4 650 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 SLC43A3Q8NBI5 491 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 RASGRP4Q8TDF6 673 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 UTP4Q969X6 686 aaKnown RBP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 RBM17Q96I25 401 aaKnown RBP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 PSMD1Q99460 953 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 TINF2Q9BSI4 451 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 GLIS2Q9BZE0 524 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 TMX4Q9H1E5 349 aaPredicted RBP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 ADARB2Q9NS39 739 aaKnown RBP10□□□□□ -0.81
TRAPPC12-221ENST00000489032 PCDHGC5Q9Y5F6 944 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 ABCC12Q96J65 1359 aa10□□□□□ -0.81
TRAPPC12-221ENST00000489032 KLRG2A4D1S0 409 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 FANCGO15287 622 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 PDE8AO60658 829 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 CRKP46108 304 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 CDK8P49336 464 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 HUNKP57058 714 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 PKN2Q16513 984 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 Q6ZS46 218 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 DDX46Q7L014 1031 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 UBE3BQ7Z3V4 1068 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 SLITRK4Q8IW52 837 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 FTSJ3Q8IY81 847 aaKnown RBP9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 RNF214Q8ND24 703 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 CPLX3Q8WVH0 158 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 BRMS1Q9HCU9 246 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 RNF186Q9NXI6 227 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 HDAC5Q9UQL6 1122 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 EFR3BQ9Y2G0 817 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 ACTL7BQ9Y614 415 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 TACC3Q9Y6A5 838 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 CDHR2Q9BYE9 1310 aa9.99□□□□□ -0.81
TRAPPC12-221ENST00000489032 GRM8O00222 908 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 RAB6AP20340 208 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 TTLL4Q14679 1199 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 CRY2Q49AN0 593 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 CCDC152Q4G0S7 254 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 GK5Q6ZS86 529 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 CYFIP1Q7L576 1253 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 KCT2Q8NC54 265 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 C2CD4AQ8NCU7 369 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 ZNF507Q8TCN5 953 aa9.98□□□□□ -0.81
TRAPPC12-221ENST00000489032 SEC16BQ96JE7 1060 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms