RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 ZGPATQ8N5A5 531 aaKnown RBP6.28□□□□□ -1.4
SF3A3-207ENST00000488934 WDR66Q8TBY9 1149 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 FBF1Q8TES7 1133 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 HHIPL1Q96JK4 782 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 ABCB6Q9NP58 842 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 ZFP64Q9NPA5 681 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 PPP2R3BQ9Y5P8 575 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 PNMA6FA0A0J9YX94 578 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 WTIPA6NIX2 430 aaPredicted RBP6.27□□□□□ -1.41
SF3A3-207ENST00000488934 RASSF10A6NK89 507 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 SNAP23O00161 211 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 WNT10BO00744 389 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 HMMRO75330 724 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 USP11P51784 963 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 ATP8B2P98198 1209 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 OS9Q13438 667 aaPredicted RBP6.27□□□□□ -1.41
SF3A3-207ENST00000488934 ZNF423Q2M1K9 1284 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 DEFB115Q30KQ5 88 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 ARTNQ5T4W7 220 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 ANGEL2Q5VTE6 544 aaKnown RBP6.27□□□□□ -1.41
SF3A3-207ENST00000488934 RNF43Q68DV7 783 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 BEND4Q6ZU67 534 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 ATG9AQ7Z3C6 839 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 FBXO33Q7Z6M2 555 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 C2orf69Q8N8R5 385 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 JMYQ8N9B5 988 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 SSH3Q8TE77 659 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 FAM83CQ9BQN1 747 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 DBNDD2Q9BQY9 259 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 GLIS2Q9BZE0 524 aaPredicted RBP6.27□□□□□ -1.41
SF3A3-207ENST00000488934 C7orf69Q9H7B7 122 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 ZNF408Q9H9D4 720 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 RAD18Q9NS91 495 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 DENND2AQ9ULE3 1009 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 THSD7BQ9C0I4 1608 aa6.27□□□□□ -1.41
SF3A3-207ENST00000488934 PDS5AQ29RF7 1337 aaKnown RBP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 SALL1Q9NSC2 1324 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 CEP350Q5VT06 3117 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 PNMA6EA0A0J9YXQ4 647 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 A0A1B0GUL7 405 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 SHTN1A0MZ66 631 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 TRAF5O00463 557 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 IGSF3O75054 1194 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 RLBP1P12271 317 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 PDIA4P13667 645 aaKnown RBP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 MAOBP27338 520 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 GRIK1P39086 918 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 TNNI2P48788 182 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 RBM5P52756 815 aaKnown RBP eCLIP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 FGD1P98174 961 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 HDLBPQ00341 1268 aaKnown RBP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 NFIAQ12857 509 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 GRM2Q14416 872 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 DSC3Q14574 896 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 ENOX2Q16206 610 aaKnown RBP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 CFAP100Q494V2 611 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 GORABQ5T7V8 394 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 ALG1LQ6GMV1 187 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 NBPF11Q86T75 865 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 SAPCD2Q86UD0 394 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 USP48Q86UV5 1035 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 RPAP2Q8IXW5 612 aaPredicted RBP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 DNAJC5GQ8N7S2 189 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 EPS8L3Q8TE67 593 aaKnown RBP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 TEKT1Q969V4 418 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 ASB16Q96NS5 453 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 MRIQ9BWK5 157 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 GPR108Q9NPR9 543 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 TMOD2Q9NZR1 351 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 TTF2Q9UNY4 1162 aaKnown RBP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 PA2G4Q9UQ80 394 aaKnown RBP6.26□□□□□ -1.41
SF3A3-207ENST00000488934 TNNQ9UQP3 1299 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 MYH2Q9UKX2 1941 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 MAST2Q6P0Q8 1798 aa6.26□□□□□ -1.41
SF3A3-207ENST00000488934 AKAP11Q9UKA4 1901 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 ADM5C9JUS6 153 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 F8W031 263 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 GIPC1O14908 333 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 SURF6O75683 361 aaKnown RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 TIAF1O95411 115 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 LDHBP07195 334 aaKnown RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 UQCRFS1P1P0C7P4 283 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 MAP4P27816 1152 aaKnown RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 MAP2K2P36507 400 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 MAPK8P45983 427 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 FCGRTP55899 365 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 HTRA3P83110 453 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 MAP2K1Q02750 393 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 TFCP2Q12800 502 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 CHAF1AQ13111 956 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 CCDC158Q5M9N0 1113 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 CST9Q5W186 159 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 SPTY2D1Q68D10 685 aaPredicted RBP6.25□□□□□ -1.41
SF3A3-207ENST00000488934 CEP85Q6P2H3 762 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 PAOXQ6QHF9 649 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 TRIM42Q8IWZ5 723 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 CERS5Q8N5B7 392 aa6.25□□□□□ -1.41
SF3A3-207ENST00000488934 PANK1Q8TE04 598 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms