RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ALDH8A1Q9H2A2 487 aaPredicted RBP15.96■□□□□ 0.15
SPTLC1-207ENST00000488921 HIPK3Q9H422 1215 aa15.96■□□□□ 0.15
SPTLC1-207ENST00000488921 MMP3P08254 477 aa15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 MYCLP12524 364 aaPredicted RBP15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 PTPN11Q06124 597 aaPredicted RBP15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 ARHGAP1Q07960 439 aa15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 PGM5Q15124 567 aa15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 LY6KQ17RY6 165 aa15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 NFRKBQ6P4R8 1299 aa15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 PIBF1Q8WXW3 757 aa15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 CUL5Q93034 780 aa15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 EMID1Q96A84 441 aaPredicted RBP15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 DDX41Q9UJV9 622 aaKnown RBP15.95■□□□□ 0.14
SPTLC1-207ENST00000488921 STAM2O75886 525 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 HMGB1P09429 215 aaKnown RBP15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 CASTP20810 708 aaKnown RBP15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 EPHB4P54760 987 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 LAMC2Q13753 1193 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 TSGA10IPQ3SY00 556 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 FAM47CQ5HY64 1035 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 ZNF697Q5TEC3 545 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 FCHSD1Q86WN1 690 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 MICU3Q86XE3 530 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 AFG1LQ8WV93 481 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 LRRC2Q9BYS8 371 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 TRPV6Q9H1D0 765 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 FRMPD4Q14CM0 1322 aa15.94■□□□□ 0.14
SPTLC1-207ENST00000488921 PLEKHA8P1O95397 391 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 TGFB3P10600 412 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 CSF2RAP15509 400 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 CYP2C18P33260 490 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 DGKDQ16760 1214 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 NBPF20Q3BBV1 942 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 GNPTABQ3T906 1256 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 Q7L0L9 218 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 VSIG10LQ86VR7 867 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 FANCBQ8NB91 859 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 SMARCC2Q8TAQ2 1214 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.93■□□□□ 0.141e-6■□□□□ 8.5
SPTLC1-207ENST00000488921 NOC4LQ9BVI4 516 aaKnown RBP15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 KATNAL1Q9BW62 490 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 MTIF3Q9H2K0 278 aaKnown RBP15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 IL23AQ9NPF7 189 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 RBM28Q9NW13 759 aaKnown RBP15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 MTMR10Q9NXD2 777 aa15.93■□□□□ 0.14
SPTLC1-207ENST00000488921 PIK3CDO00329 1044 aa15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 RXRAP19793 462 aa15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 APOA5Q6Q788 366 aa15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 TMTC3Q6ZXV5 915 aa15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 DHX32Q7L7V1 743 aaKnown RBP15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 DHX37Q8IY37 1157 aaKnown RBP15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 SRBD1Q8N5C6 995 aaKnown RBP15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 PPTC7Q8NI37 304 aa15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 DOCK5Q9H7D0 1870 aa15.92■□□□□ 0.14
SPTLC1-207ENST00000488921 TMEM265A0A087WTH1 108 aa15.91■□□□□ 0.14
SPTLC1-207ENST00000488921 COL9A3Q14050 684 aaPredicted RBP15.91■□□□□ 0.14
SPTLC1-207ENST00000488921 TMEM240Q5SV17 173 aa15.91■□□□□ 0.14
SPTLC1-207ENST00000488921 RPUSD2Q8IZ73 545 aaKnown RBP15.91■□□□□ 0.14
SPTLC1-207ENST00000488921 IL31RAQ8NI17 732 aa15.91■□□□□ 0.14
SPTLC1-207ENST00000488921 TRMT13Q9NUP7 481 aaKnown RBP15.91■□□□□ 0.14
SPTLC1-207ENST00000488921 NOD1Q9Y239 953 aa15.91■□□□□ 0.14
SPTLC1-207ENST00000488921 GBF1Q92538 1859 aa15.91■□□□□ 0.14
SPTLC1-207ENST00000488921 SCN5AQ14524 2016 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 ZBTB43O43298 467 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 RGS20O76081 388 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 REC8O95072 547 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 PFKMP08237 780 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 RCAN1P53805 252 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 FGD1P98174 961 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 EXOSC10Q01780 885 aaKnown RBP15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 CELF3Q5SZQ8 465 aaKnown RBP15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 MYSM1Q5VVJ2 828 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 XRRA1Q6P2D8 792 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 SESTD1Q86VW0 696 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 RASEFQ8IZ41 740 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 CMTR1Q8N1G2 835 aaKnown RBP15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 CCDC155Q8N6L0 562 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 STXBP5LQ9Y2K9 1186 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 UMODL1Q5DID0 1318 aa15.9■□□□□ 0.14
SPTLC1-207ENST00000488921 TRIP12Q14669 1992 aaPredicted RBP15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 PITPNM1O00562 1244 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 GGPS1O95749 300 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 F2P00734 622 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 ACRP10323 421 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 UBA1P22314 1058 aaKnown RBP15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 CCL23P55773 120 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 CHMP4BP1P59074 171 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 BFSP2Q13515 415 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 RTN1Q16799 776 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 ADCK5Q3MIX3 580 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 PCNX4Q63HM2 1172 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 ZNF365Q70YC5 407 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 RAB11FIP4Q86YS3 637 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 TEX2Q8IWB9 1127 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 SPATA33Q96N06 139 aa15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 INPP4AQ96PE3 977 aaPredicted RBP15.89■□□□□ 0.13
SPTLC1-207ENST00000488921 WNT8AQ9H1J5 351 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms