RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SH2B2O14492 632 aaPredicted RBP13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 DDAH1O94760 285 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 FGBP02675 491 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 KIF5BP33176 963 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 NFRKBQ6P4R8 1299 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 VSIG10LQ86VR7 867 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 TMTC2Q8N394 836 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 SAMD3Q8N6K7 520 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 IL31RAQ8NI17 732 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 CTCFLQ8NI51 663 aaPredicted RBP13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 SCLYQ96I15 445 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 TMEM87BQ96K49 555 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 CDX2Q99626 313 aaPredicted RBP13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 LRRC2Q9BYS8 371 aa13.82□□□□□ -0.2
CCHCR1-215ENST00000488920 CCDC69A6NI79 296 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 SORBS3O60504 671 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 RGS20O76081 388 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 MMP3P08254 477 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 RXRAP19793 462 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 CASTP20810 708 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 PGM5Q15124 567 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 RASIP1Q5U651 963 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 PSRC1Q6PGN9 363 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 OTOP2Q7RTS6 562 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 RAB11FIP4Q86YS3 637 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 DHX37Q8IY37 1157 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 CMTR1Q8N1G2 835 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 HERVK_113Q902F9 699 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 MTA3Q9BTC8 594 aa13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 CXXC1Q9P0U4 656 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-215ENST00000488920 PLEKHA8P1O95397 391 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 DNAJB2P25686 324 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 CCND2P30279 289 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 PBX2P40425 430 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 DGKDQ16760 1214 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 RPUSD2Q8IZ73 545 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 KAT2BQ92831 832 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 VWCEQ96DN2 955 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 SPZ1Q9BXG8 430 aa13.8□□□□□ -0.2
CCHCR1-215ENST00000488920 SMARCA1P28370 1054 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 LIFRP42702 1097 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 GNAQP50148 359 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 SP2Q02086 613 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 PTPN11Q06124 597 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 CELF3Q5SZQ8 465 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 RNF20Q5VTR2 975 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 DEFB128Q7Z7B8 93 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 CCDC82Q8N4S0 544 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 RETREG2Q8NC44 543 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 PPTC7Q8NI37 304 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 MYLIPQ8WY64 445 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 EMID1Q96A84 441 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 TIFAQ96CG3 184 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 SEC63Q9UGP8 760 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 NOD1Q9Y239 953 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
CCHCR1-215ENST00000488920 hCG_1642624A0A1W2PR95 340 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 CDC45O75419 566 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 GGPS1O95749 300 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 ZNF286BP0CG31 522 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 CALM1P0DP23 149 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 CALM2P0DP24 149 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 CALM3P0DP25 149 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 GRIN2CQ14957 1233 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 PTGISQ16647 500 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 MYSM1Q5VVJ2 828 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 GDF6Q6KF10 455 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 KCNV1Q6PIU1 500 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 USP17L6PQ6QN14 398 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 FANCBQ8NB91 859 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 SPATA33Q96N06 139 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 NEK1Q96PY6 1258 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 ALG1Q9BT22 464 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 PBX4Q9BYU1 374 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 ZNF576Q9H609 170 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 BCAS3Q9H6U6 928 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 RTEL1Q9NZ71 1219 aa13.78□□□□□ -0.2
CCHCR1-215ENST00000488920 A0A0C4DFX4 3053 aa13.77□□□□□ -0.2
CCHCR1-215ENST00000488920 TMEM265A0A087WTH1 108 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 IQCF3P0C7M6 154 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 TGFB3P10600 412 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 PSEN2P49810 448 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 MFSD10Q14728 455 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 HSDL1Q3SXM5 330 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 C7orf31Q8N865 590 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 CUL5Q93034 780 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 CTAGE1Q96RT6 745 aa13.77□□□□□ -0.21
CCHCR1-215ENST00000488920 MLXIPQ9HAP2 919 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms