RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 PIGSQ96S52 555 aa21.25■□□□□ 0.99
ATG9A-222ENST00000488833 MRVI1Q9Y6F6 885 aa21.25■□□□□ 0.99
ATG9A-222ENST00000488833 EYSQ5T1H1 3165 aa21.24■□□□□ 0.99
ATG9A-222ENST00000488833 EIF3JO75822 258 aaKnown RBP21.24■□□□□ 0.99
ATG9A-222ENST00000488833 HOXA13P31271 388 aaPredicted RBP21.24■□□□□ 0.99
ATG9A-222ENST00000488833 TMEM67Q5HYA8 995 aa21.24■□□□□ 0.99
ATG9A-222ENST00000488833 VWCEQ96DN2 955 aa21.24■□□□□ 0.99
ATG9A-222ENST00000488833 NKX2-4Q9H2Z4 354 aa21.24■□□□□ 0.99
ATG9A-222ENST00000488833 DDX41Q9UJV9 622 aaKnown RBP21.24■□□□□ 0.99
ATG9A-222ENST00000488833 SLC4A7Q9Y6M7 1214 aa21.24■□□□□ 0.99
ATG9A-222ENST00000488833 PFKMP08237 780 aa21.23■□□□□ 0.99
ATG9A-222ENST00000488833 MYCLP12524 364 aaPredicted RBP21.23■□□□□ 0.99
ATG9A-222ENST00000488833 ANTXR2P58335 489 aa21.23■□□□□ 0.99
ATG9A-222ENST00000488833 TRAF1Q13077 416 aa21.23■□□□□ 0.99
ATG9A-222ENST00000488833 CATIPQ7Z7H3 387 aa21.23■□□□□ 0.99
ATG9A-222ENST00000488833 RETREG2Q8NC44 543 aa21.23■□□□□ 0.99
ATG9A-222ENST00000488833 GAS2L1Q99501 681 aaPredicted RBP21.23■□□□□ 0.99
ATG9A-222ENST00000488833 PDCD2LQ9BRP1 358 aa21.23■□□□□ 0.99
ATG9A-222ENST00000488833 COL25A1Q9BXS0 654 aaPredicted RBP21.23■□□□□ 0.99
ATG9A-222ENST00000488833 PRDM12Q9H4Q4 367 aa21.23■□□□□ 0.99
ATG9A-222ENST00000488833 RIOX1Q9H6W3 641 aa21.23■□□□□ 0.99
ATG9A-222ENST00000488833 MAP3K20Q9NYL2 800 aaKnown RBP21.23■□□□□ 0.99
ATG9A-222ENST00000488833 RBM8AQ9Y5S9 174 aaKnown RBP21.23■□□□□ 0.99
ATG9A-222ENST00000488833 MYH7BA7E2Y1 1941 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 PITPNM1O00562 1244 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 CASTP20810 708 aaKnown RBP21.22■□□□□ 0.99
ATG9A-222ENST00000488833 RFC2P35250 354 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 TROAPQ12815 778 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 BFSP2Q13515 415 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 DGKDQ16760 1214 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 MB21D2Q8IYB1 491 aaPredicted RBP21.22■□□□□ 0.99
ATG9A-222ENST00000488833 KAT2BQ92831 832 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 MAP4K1Q92918 833 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 EMID1Q96A84 441 aaPredicted RBP21.22■□□□□ 0.99
ATG9A-222ENST00000488833 YBX2Q9Y2T7 364 aaKnown RBP21.22■□□□□ 0.99
ATG9A-222ENST00000488833 CHD9Q3L8U1 2897 aa21.22■□□□□ 0.99
ATG9A-222ENST00000488833 GCOM1H8Y6P7 765 aaPredicted RBP21.21■□□□□ 0.99
ATG9A-222ENST00000488833 CYTH3O43739 400 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 POLR2MP0CAP2 368 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 ACTN1P12814 892 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 RABGGTBP53611 331 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 PGM5Q15124 567 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 PTGISQ16647 500 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 SAMD3Q8N6K7 520 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 CCDC155Q8N6L0 562 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 IL31RAQ8NI17 732 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 SLC28A3Q9HAS3 691 aa21.21■□□□□ 0.99
ATG9A-222ENST00000488833 TRIP12Q14669 1992 aaPredicted RBP21.21■□□□□ 0.99
ATG9A-222ENST00000488833 PNMA6FA0A0J9YX94 578 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 IQCF3P0C7M6 154 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 ATP2A2P16615 1042 aaKnown RBP21.2■□□□□ 0.98
ATG9A-222ENST00000488833 LAMC2Q13753 1193 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 GDF6Q6KF10 455 aaPredicted RBP21.2■□□□□ 0.98
ATG9A-222ENST00000488833 SESTD1Q86VW0 696 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 FCHSD1Q86WN1 690 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 DHX37Q8IY37 1157 aaKnown RBP21.2■□□□□ 0.98
ATG9A-222ENST00000488833 PPTC7Q8NI37 304 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 PIBF1Q8WXW3 757 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 TTC28Q96AY4 2481 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 PRUNE2Q8WUY3 3088 aa21.2■□□□□ 0.98
ATG9A-222ENST00000488833 SORBS3O60504 671 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 RGS20O76081 388 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 ZNF286BP0CG31 522 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 CCND2P30279 289 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 PSEN2P49810 448 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 USP38Q8NB14 1042 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 IGDCC4Q8TDY8 1250 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 ALG1Q9BT22 464 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 KATNAL1Q9BW62 490 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 FTOQ9C0B1 505 aaKnown RBP eCLIP21.19■□□□□ 0.98
ATG9A-222ENST00000488833 TET1Q8NFU7 2136 aa21.19■□□□□ 0.98
ATG9A-222ENST00000488833 GGPS1O95749 300 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 PPP2R2DQ66LE6 453 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 KCNV1Q6PIU1 500 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 CASC1Q6TDU7 716 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 VSIG10LQ86VR7 867 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 C7orf31Q8N865 590 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 CTCFLQ8NI51 663 aaPredicted RBP21.18■□□□□ 0.98
ATG9A-222ENST00000488833 CAGE1Q8TC20 777 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 ZFP91Q96JP5 570 aaPredicted RBP21.18■□□□□ 0.98
ATG9A-222ENST00000488833 MYL10Q9BUA6 226 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 LY9Q9HBG7 655 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 PCDHA11Q9Y5I1 949 aa21.18■□□□□ 0.98
ATG9A-222ENST00000488833 PRC1O43663 620 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 DDAH1O94760 285 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 F2P00734 622 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 MYOGP15173 224 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 UBA1P22314 1058 aaKnown RBP21.17■□□□□ 0.98
ATG9A-222ENST00000488833 MFSD10Q14728 455 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 ZNF654Q8IZM8 581 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 AFAP1L1Q8TED9 768 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 SPATA33Q96N06 139 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 CTAGE1Q96RT6 745 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 HDAC6Q9UBN7 1215 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 GTF2IRD1Q9UHL9 959 aa21.17■□□□□ 0.98
ATG9A-222ENST00000488833 KIF5BP33176 963 aa21.16■□□□□ 0.98
ATG9A-222ENST00000488833 KIAA0753Q2KHM9 967 aa21.16■□□□□ 0.98
ATG9A-222ENST00000488833 CELF3Q5SZQ8 465 aaKnown RBP21.16■□□□□ 0.98
ATG9A-222ENST00000488833 MYSM1Q5VVJ2 828 aa21.16■□□□□ 0.98
ATG9A-222ENST00000488833 NFXL1Q6ZNB6 911 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms