RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 NMIQ13287 307 aaPredicted RBP14.36□□□□□ -0.11
TTC3-221ENST00000488522 PTGISQ16647 500 aa14.36□□□□□ -0.11
TTC3-221ENST00000488522 ANKRD45Q5TZF3 282 aa14.36□□□□□ -0.11
TTC3-221ENST00000488522 GDF6Q6KF10 455 aaPredicted RBP14.36□□□□□ -0.11
TTC3-221ENST00000488522 MFSD6Q6ZSS7 791 aa14.36□□□□□ -0.11
TTC3-221ENST00000488522 MICALL1Q8N3F8 863 aa14.36□□□□□ -0.11
TTC3-221ENST00000488522 SYTL5Q8TDW5 730 aaPredicted RBP14.36□□□□□ -0.11
TTC3-221ENST00000488522 AFG1LQ8WV93 481 aa14.36□□□□□ -0.11
TTC3-221ENST00000488522 ESR2Q92731 530 aa14.36□□□□□ -0.11
TTC3-221ENST00000488522 NECAB3Q96P71 396 aaPredicted RBP14.36□□□□□ -0.11
TTC3-221ENST00000488522 COL20A1Q9P218 1284 aa14.36□□□□□ -0.11
TTC3-221ENST00000488522 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
TTC3-221ENST00000488522 MYH6P13533 1939 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 HAS3O00219 553 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 TLL1O43897 1013 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 F2P00734 622 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 HOXD8P13378 290 aaPredicted RBP14.35□□□□□ -0.11
TTC3-221ENST00000488522 SELPP16109 830 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 HAND2P61296 217 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 GRB10Q13322 594 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 MKRN4PQ13434 485 aaPredicted RBP14.35□□□□□ -0.11
TTC3-221ENST00000488522 CDC37Q16543 378 aaPredicted RBP14.35□□□□□ -0.11
TTC3-221ENST00000488522 CCDC178Q5BJE1 867 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 CNKSR3Q6P9H4 555 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 LRRC8DQ7L1W4 858 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 SMC5Q8IY18 1101 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 NSUN6Q8TEA1 469 aaKnown RBP14.35□□□□□ -0.11
TTC3-221ENST00000488522 ARNTL2Q8WYA1 636 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.11
TTC3-221ENST00000488522 ZBTB47Q9UFB7 747 aaPredicted RBP14.35□□□□□ -0.11
TTC3-221ENST00000488522 RAPGEFL1Q9UHV5 662 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 NOD1Q9Y239 953 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 SIP14410 1827 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 NEDD4P46934 1319 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 PIEZO1Q92508 2521 aa14.35□□□□□ -0.11
TTC3-221ENST00000488522 EFCAB14O75071 495 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 CASTP20810 708 aaKnown RBP14.34□□□□□ -0.11
TTC3-221ENST00000488522 KCNJ6P48051 423 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 MFAP1P55081 439 aaKnown RBP14.34□□□□□ -0.11
TTC3-221ENST00000488522 STXBP2Q15833 593 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 TRIM71Q2Q1W2 868 aaKnown RBP14.34□□□□□ -0.11
TTC3-221ENST00000488522 USH1GQ495M9 461 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 ASPRV1Q53RT3 343 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 KRT40Q6A162 431 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 TRAF7Q6Q0C0 670 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 MCF2L2Q86YR7 1114 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 PPP1R13LQ8WUF5 828 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 CERS4Q9HA82 394 aa14.34□□□□□ -0.11
TTC3-221ENST00000488522 COL4A6Q14031 1691 aa14.33□□□□□ -0.11
TTC3-221ENST00000488522 ABHD14A-ACY1A0A1B0GW23 586 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 LCHNA4D1U4 455 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 NBNO60934 754 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 GJB5O95377 273 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 GOLGA8HP0CJ92 632 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 SKIV2LQ15477 1246 aaKnown RBP14.33□□□□□ -0.12
TTC3-221ENST00000488522 DGKDQ16760 1214 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 LY6KQ17RY6 165 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 B4GALNT3Q6L9W6 998 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 SPRED2Q7Z698 418 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 ADGRF4Q8IZF3 695 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 PPTC7Q8NI37 304 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 TBC1D5Q92609 795 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 HLA-CQ95604 372 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 TAAR1Q96RJ0 339 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 KATNAL1Q9BW62 490 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 PPP4R2Q9NY27 417 aa14.33□□□□□ -0.12
TTC3-221ENST00000488522 DDX41Q9UJV9 622 aaKnown RBP14.33□□□□□ -0.12
TTC3-221ENST00000488522 OPLAHO14841 1288 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 EIF3JO75822 258 aaKnown RBP14.32□□□□□ -0.12
TTC3-221ENST00000488522 CKBP12277 381 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 HSD17B4P51659 736 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 ERVK-21P61565 698 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 DEFB103AP81534 67 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 PTK7Q13308 1070 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 QRICH1Q2TAL8 776 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 IQCA1Q86XH1 822 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 RMDN3Q96TC7 470 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 RAD9AQ99638 391 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 CPVLQ9H3G5 476 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 MAP3K20Q9NYL2 800 aaKnown RBP14.32□□□□□ -0.12
TTC3-221ENST00000488522 HDAC6Q9UBN7 1215 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 MRPL11Q9Y3B7 192 aaKnown RBP14.32□□□□□ -0.12
TTC3-221ENST00000488522 MICAL3Q7RTP6 2002 aa14.32□□□□□ -0.12
TTC3-221ENST00000488522 ZNF213O14771 459 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 SDSP20132 328 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 HOXC8P31273 242 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 PSEN2P49810 448 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 LAMC2Q13753 1193 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 TCTN1Q2MV58 587 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 SEPT14Q6ZU15 432 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 CENPQQ7L2Z9 268 aaPredicted RBP14.31□□□□□ -0.12
TTC3-221ENST00000488522 SAMD3Q8N6K7 520 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 ENAHQ8N8S7 591 aaPredicted RBP14.31□□□□□ -0.12
TTC3-221ENST00000488522 MTMR8Q96EF0 704 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 KAT14Q9H8E8 782 aa14.31□□□□□ -0.12
TTC3-221ENST00000488522 PXMP2Q9NR77 195 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms