RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TXNDC11Q6PKC3 985 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 CTU1Q7Z7A3 348 aaKnown RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 ADGRA1Q86SQ6 560 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 FAM83AQ86UY5 434 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 WFDC8Q8IUA0 241 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 FAM43AQ8N2R8 423 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 IL22RA1Q8N6P7 574 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 TMEM102Q8N9M5 508 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 SPATA5Q8NB90 893 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 FAM151AQ8WW52 585 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 CCDC74AQ96AQ1 378 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 EAF2Q96CJ1 260 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 MRIQ9BWK5 157 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 DNAJC25Q9H1X3 360 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 IL1RAPL2Q9NP60 686 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 SH2B1Q9NRF2 756 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 DBNLQ9UJU6 430 aaKnown RBP7.24□□□□□ -1.25
CDHR3-213ENST00000488386 CSADQ9Y600 493 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 MROH7-TTC4A0A0A0MT08 1334 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 GAKO14976 1311 aa7.24□□□□□ -1.25
CDHR3-213ENST00000488386 RFX7Q2KHR2 1363 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 KRBA1A5PL33 1030 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 ANKRD33BA6NCL7 494 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 FKTNO75072 461 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 DEAF1O75398 565 aaPredicted RBP7.23□□□□□ -1.25
CDHR3-213ENST00000488386 ITGB2P05107 769 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 NEFLP07196 543 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 RHBDL3P58872 404 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 PLCB3Q01970 1234 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 NPAS4Q8IUM7 802 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.23□□□□□ -1.25
CDHR3-213ENST00000488386 CD99L2Q8TCZ2 262 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 EPS8L3Q8TE67 593 aaKnown RBP7.23□□□□□ -1.25
CDHR3-213ENST00000488386 NXPE3Q969Y0 559 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 NSUN4Q96CB9 384 aaKnown RBP7.23□□□□□ -1.25
CDHR3-213ENST00000488386 ZNF341Q9BYN7 854 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 ANTXR1Q9H6X2 564 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 PIH1D3Q9NQM4 214 aaKnown RBP7.23□□□□□ -1.25
CDHR3-213ENST00000488386 AATFQ9NY61 560 aaKnown RBP eCLIP7.23□□□□□ -1.25
CDHR3-213ENST00000488386 NOP53Q9NZM5 478 aaKnown RBP7.23□□□□□ -1.25
CDHR3-213ENST00000488386 RCAN3Q9UKA8 241 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 CDK5RAP2Q96SN8 1893 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 MAST2Q6P0Q8 1798 aa7.23□□□□□ -1.25
CDHR3-213ENST00000488386 SIPA1L1O43166 1804 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 ATRNL1Q5VV63 1379 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 RPAP1Q9BWH6 1393 aaPredicted RBP7.22□□□□□ -1.25
CDHR3-213ENST00000488386 BTBD19C9JJ37 291 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 PIK3R2O00459 728 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 CDC25BP30305 580 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 DYNLL1P63167 89 aaKnown RBP7.22□□□□□ -1.25
CDHR3-213ENST00000488386 TAF1CQ15572 869 aaPredicted RBP7.22□□□□□ -1.25
CDHR3-213ENST00000488386 DCAF15Q66K64 600 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 AACSQ86V21 672 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 SIRT2Q8IXJ6 389 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 FMR1NBQ8N0W7 255 aaPredicted RBP7.22□□□□□ -1.25
CDHR3-213ENST00000488386 ZGPATQ8N5A5 531 aaKnown RBP7.22□□□□□ -1.25
CDHR3-213ENST00000488386 SH3RF3Q8TEJ3 882 aaPredicted RBP7.22□□□□□ -1.25
CDHR3-213ENST00000488386 YTHDC1Q96MU7 727 aaKnown RBP7.22□□□□□ -1.25
CDHR3-213ENST00000488386 TCF12Q99081 682 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 ARHGAP39Q9C0H5 1083 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 BHLHE41Q9C0J9 482 aaPredicted RBP7.22□□□□□ -1.25
CDHR3-213ENST00000488386 LRP2BPQ9P2M1 347 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 TRIM17Q9Y577 477 aa7.22□□□□□ -1.25
CDHR3-213ENST00000488386 GPR75-ASB3A0A0A6YYF3 556 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 UQCRFS1P1P0C7P4 283 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 PTPRAP18433 802 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 CDC27P30260 824 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 GTF2A2P52657 109 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 RRP1BQ14684 758 aaKnown RBP7.21□□□□□ -1.26
CDHR3-213ENST00000488386 SHROOM1Q2M3G4 852 aaPredicted RBP7.21□□□□□ -1.26
CDHR3-213ENST00000488386 CCDC158Q5M9N0 1113 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 KIAA0319Q5VV43 1072 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 FKBP1CQ5VVH2 108 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 SPTY2D1Q68D10 685 aaPredicted RBP7.21□□□□□ -1.26
CDHR3-213ENST00000488386 ERO1BQ86YB8 467 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 MAPKAPK5Q8IW41 473 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 TEX11Q8IYF3 940 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 IDI2Q9BXS1 227 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 ADAM19Q9H013 955 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 SOX13Q9UN79 622 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 NOP58Q9Y2X3 529 aaKnown RBP7.21□□□□□ -1.26
CDHR3-213ENST00000488386 PHIPQ8WWQ0 1821 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 ATAD5Q96QE3 1844 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 DOCK1Q14185 1865 aa7.21□□□□□ -1.26
CDHR3-213ENST00000488386 PDS5AQ29RF7 1337 aaKnown RBP7.21□□□□□ -1.26
CDHR3-213ENST00000488386 LINC01387J3KSC0 135 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 TM4SF5O14894 197 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 SMARCA5O60264 1052 aaPredicted RBP7.2□□□□□ -1.26
CDHR3-213ENST00000488386 ENTPD3O75355 529 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 IDH1O75874 414 aaKnown RBP7.2□□□□□ -1.26
CDHR3-213ENST00000488386 GDF11O95390 407 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 CHGBP05060 677 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 SPATA31C1P0DKV0 1188 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 GRIA4P48058 902 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 INHBEP58166 350 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 PPIL2Q13356 520 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 MOGSQ13724 837 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 GRM2Q14416 872 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 GRIK4Q16099 956 aa7.2□□□□□ -1.26
CDHR3-213ENST00000488386 HGSNATQ68CP4 663 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms