RNA–Protein interactions for RNA: ENST00000488069.5

CCDC12-205, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-205ENST00000488069 LRRC2Q9BYS8 371 aa20.94■□□□□ 0.94
CCDC12-205ENST00000488069 MTMR10Q9NXD2 777 aa20.94■□□□□ 0.94
CCDC12-205ENST00000488069 PLEKHA8P1O95397 391 aa20.93■□□□□ 0.94
CCDC12-205ENST00000488069 MMP3P08254 477 aa20.93■□□□□ 0.94
CCDC12-205ENST00000488069 RXRAP19793 462 aa20.93■□□□□ 0.94
CCDC12-205ENST00000488069 NBPF20Q3BBV1 942 aa20.93■□□□□ 0.94
CCDC12-205ENST00000488069 FAM47CQ5HY64 1035 aa20.93■□□□□ 0.94
CCDC12-205ENST00000488069 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.93■□□□□ 0.942e-8■■■■□ 25.3
CCDC12-205ENST00000488069 NOC4LQ9BVI4 516 aaKnown RBP20.93■□□□□ 0.94
CCDC12-205ENST00000488069 DDX41Q9UJV9 622 aaKnown RBP20.93■□□□□ 0.94
CCDC12-205ENST00000488069 CCND2P30279 289 aa20.92■□□□□ 0.94
CCDC12-205ENST00000488069 ZNF697Q5TEC3 545 aa20.92■□□□□ 0.94
CCDC12-205ENST00000488069 NFRKBQ6P4R8 1299 aa20.92■□□□□ 0.94
CCDC12-205ENST00000488069 PSRC1Q6PGN9 363 aaPredicted RBP20.92■□□□□ 0.94
CCDC12-205ENST00000488069 KCNV1Q6PIU1 500 aa20.92■□□□□ 0.94
CCDC12-205ENST00000488069 SYNE3Q6ZMZ3 975 aa20.92■□□□□ 0.94
CCDC12-205ENST00000488069 VSIG10LQ86VR7 867 aa20.92■□□□□ 0.94
CCDC12-205ENST00000488069 SGMS1Q86VZ5 419 aa20.92■□□□□ 0.94
CCDC12-205ENST00000488069 SRBD1Q8N5C6 995 aaKnown RBP20.92■□□□□ 0.94
CCDC12-205ENST00000488069 EMID1Q96A84 441 aaPredicted RBP20.92■□□□□ 0.94
CCDC12-205ENST00000488069 TRMT13Q9NUP7 481 aaKnown RBP20.92■□□□□ 0.94
CCDC12-205ENST00000488069 NEFLP07196 543 aa20.91■□□□□ 0.94
CCDC12-205ENST00000488069 CASTP20810 708 aaKnown RBP20.91■□□□□ 0.94
CCDC12-205ENST00000488069 PTPN11Q06124 597 aaPredicted RBP20.91■□□□□ 0.94
CCDC12-205ENST00000488069 LAMC2Q13753 1193 aa20.91■□□□□ 0.94
CCDC12-205ENST00000488069 KRT32Q14532 448 aa20.91■□□□□ 0.94
CCDC12-205ENST00000488069 TSGA10IPQ3SY00 556 aa20.91■□□□□ 0.94
CCDC12-205ENST00000488069 UMODL1Q5DID0 1318 aa20.91■□□□□ 0.94
CCDC12-205ENST00000488069 TMEM240Q5SV17 173 aa20.91■□□□□ 0.94
CCDC12-205ENST00000488069 IL31RAQ8NI17 732 aa20.91■□□□□ 0.94
CCDC12-205ENST00000488069 IL23AQ9NPF7 189 aa20.91■□□□□ 0.94
CCDC12-205ENST00000488069 COL6A3P12111 3177 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 RGS20O76081 388 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 ACRP10323 421 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 CCL23P55773 120 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 DGKDQ16760 1214 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 C16orf59Q7L2K0 433 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 DHX32Q7L7V1 743 aaKnown RBP20.9■□□□□ 0.94
CCDC12-205ENST00000488069 MICU3Q86XE3 530 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 RAB11FIP4Q86YS3 637 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 DHX37Q8IY37 1157 aaKnown RBP20.9■□□□□ 0.94
CCDC12-205ENST00000488069 CMTR1Q8N1G2 835 aaKnown RBP20.9■□□□□ 0.94
CCDC12-205ENST00000488069 FANCBQ8NB91 859 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 CUL5Q93034 780 aa20.9■□□□□ 0.94
CCDC12-205ENST00000488069 FRMPD4Q14CM0 1322 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 TGFB3P10600 412 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 CYP2C9P11712 490 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 CHMP4BP1P59074 171 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 EXOSC10Q01780 885 aaKnown RBP20.89■□□□□ 0.93
CCDC12-205ENST00000488069 TMTC3Q6ZXV5 915 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 RASEFQ8IZ41 740 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 PPTC7Q8NI37 304 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 SMARCC2Q8TAQ2 1214 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 WNT8AQ9H1J5 351 aa20.89■□□□□ 0.93
CCDC12-205ENST00000488069 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.88■□□□□ 0.93
CCDC12-205ENST00000488069 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.88■□□□□ 0.93
CCDC12-205ENST00000488069 PIK3CDO00329 1044 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 HMGB1P09429 215 aaKnown RBP20.88■□□□□ 0.93
CCDC12-205ENST00000488069 ADCK5Q3MIX3 580 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 GNPTABQ3T906 1256 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 ZNF365Q70YC5 407 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 PPP1R13LQ8WUF5 828 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 TCEANC2Q96MN5 208 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 FAM161BQ96MY7 647 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 STXBP5LQ9Y2K9 1186 aa20.88■□□□□ 0.93
CCDC12-205ENST00000488069 STAM2O75886 525 aa20.87■□□□□ 0.93
CCDC12-205ENST00000488069 GGPS1O95749 300 aa20.87■□□□□ 0.93
CCDC12-205ENST00000488069 CELF3Q5SZQ8 465 aaKnown RBP20.87■□□□□ 0.93
CCDC12-205ENST00000488069 MYSM1Q5VVJ2 828 aa20.87■□□□□ 0.93
CCDC12-205ENST00000488069 USP17L6PQ6QN14 398 aa20.87■□□□□ 0.93
CCDC12-205ENST00000488069 CCDC82Q8N4S0 544 aa20.87■□□□□ 0.93
CCDC12-205ENST00000488069 KAT2BQ92831 832 aa20.87■□□□□ 0.93
CCDC12-205ENST00000488069 ZFP91Q96JP5 570 aaPredicted RBP20.87■□□□□ 0.93
CCDC12-205ENST00000488069 KATNAL1Q9BW62 490 aa20.87■□□□□ 0.93
CCDC12-205ENST00000488069 MTIF3Q9H2K0 278 aaKnown RBP20.87■□□□□ 0.93
CCDC12-205ENST00000488069 RBM28Q9NW13 759 aaKnown RBP20.87■□□□□ 0.93
CCDC12-205ENST00000488069 NOD1Q9Y239 953 aa20.87■□□□□ 0.93
CCDC12-205ENST00000488069 MEIS2O14770 477 aa20.86■□□□□ 0.93
CCDC12-205ENST00000488069 FGBP02675 491 aa20.86■□□□□ 0.93
CCDC12-205ENST00000488069 UBA1P22314 1058 aaKnown RBP20.86■□□□□ 0.93
CCDC12-205ENST00000488069 RASIP1Q5U651 963 aa20.86■□□□□ 0.93
CCDC12-205ENST00000488069 SESTD1Q86VW0 696 aa20.86■□□□□ 0.93
CCDC12-205ENST00000488069 RPUSD2Q8IZ73 545 aaKnown RBP20.86■□□□□ 0.93
CCDC12-205ENST00000488069 SPATA33Q96N06 139 aa20.86■□□□□ 0.93
CCDC12-205ENST00000488069 GUCD1Q96NT3 240 aa20.86■□□□□ 0.93
CCDC12-205ENST00000488069 MYH7BA7E2Y1 1941 aa20.86■□□□□ 0.93
CCDC12-205ENST00000488069 TMEM265A0A087WTH1 108 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 hCG_1642624A0A1W2PR95 340 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 ZBTB43O43298 467 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 MRPS9P82933 396 aaKnown RBP20.85■□□□□ 0.93
CCDC12-205ENST00000488069 RTN1Q16799 776 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 HERVK_113Q902F9 699 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 SCLYQ96I15 445 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 INPP4AQ96PE3 977 aaPredicted RBP20.85■□□□□ 0.93
CCDC12-205ENST00000488069 SEMA6BQ9H3T3 888 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 PSTPIP2Q9H939 334 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 MLXIPQ9HAP2 919 aa20.85■□□□□ 0.93
CCDC12-205ENST00000488069 PITPNM1O00562 1244 aa20.84■□□□□ 0.93
CCDC12-205ENST00000488069 SORBS3O60504 671 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms