RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	TMTC3	Q6ZXV5	915 aa		11	□□□□□ -0.65
PTBP3-208	ENST00000487997	ARMCX2	Q7L311	632 aa		11	□□□□□ -0.65
PTBP3-208	ENST00000487997	CMTR1	Q8N1G2	835 aa	Known RBP	11	□□□□□ -0.65
PTBP3-208	ENST00000487997	SRBD1	Q8N5C6	995 aa	Known RBP	11	□□□□□ -0.65
PTBP3-208	ENST00000487997	SAMD3	Q8N6K7	520 aa		11	□□□□□ -0.65
PTBP3-208	ENST00000487997	ANKLE1	Q8NAG6	615 aa		11	□□□□□ -0.65
PTBP3-208	ENST00000487997	DNER	Q8NFT8	737 aa		11	□□□□□ -0.65
PTBP3-208	ENST00000487997	UPF3B	Q9BZI7	483 aa	Known RBP	11	□□□□□ -0.65
PTBP3-208	ENST00000487997	UPF2	Q9HAU5	1272 aa	Known RBP	11	□□□□□ -0.65
PTBP3-208	ENST00000487997	PDRG1	Q9NUG6	133 aa		11	□□□□□ -0.65
PTBP3-208	ENST00000487997	MAP3K20	Q9NYL2	800 aa	Known RBP	11	□□□□□ -0.65
PTBP3-208	ENST00000487997	TSR3	Q9UJK0	312 aa	Known RBP	11	□□□□□ -0.65
PTBP3-208	ENST00000487997	ZHX1	Q9UKY1	873 aa	Predicted RBP	11	□□□□□ -0.65
PTBP3-208	ENST00000487997	FAM184B	Q9ULE4	1060 aa		11	□□□□□ -0.65
PTBP3-208	ENST00000487997	LRRC37A2	A6NM11	1700 aa		11	□□□□□ -0.65
PTBP3-208	ENST00000487997	FARP2	O94887	1054 aa	Predicted RBP	10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	IGHA2	P01877	340 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	RARB	P10826	455 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	AKR1A1	P14550	325 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	ALDH5A1	P51649	535 aa	Predicted RBP	10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	AKAP17A	Q02040	695 aa	Known RBP	10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	PDE4D	Q08499	809 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	ACVR2B	Q13705	512 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	PADI6	Q6TGC4	694 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	NUDT18	Q6ZVK8	323 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	ARRDC4	Q8NCT1	418 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	TRPV1	Q8NER1	839 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	CUL5	Q93034	780 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	AGXT2	Q9BYV1	514 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	OGDHL	Q9ULD0	1010 aa		10.99	□□□□□ -0.65
PTBP3-208	ENST00000487997	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	PPP1R11	O60927	126 aa	Predicted RBP	10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	SNAI1	O95863	264 aa	Predicted RBP	10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	POLR2M	P0CAP2	368 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	ANKRD1	Q15327	319 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	C8orf34	Q49A92	452 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	ARHGEF16	Q5VV41	709 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	ANO1	Q5XXA6	986 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	NYAP1	Q6ZVC0	841 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	NOL8	Q76FK4	1167 aa	Known RBP	10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	HEATR3	Q7Z4Q2	680 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	NECAB2	Q7Z6G3	386 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	NSUN6	Q8TEA1	469 aa	Known RBP	10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	SHISA4	Q96DD7	197 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	FGD4	Q96M96	766 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	PURB	Q96QR8	312 aa	Known RBP	10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	RMDN3	Q96TC7	470 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	HTATIP2	Q9BUP3	242 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	SPC25	Q9HBM1	224 aa		10.98	□□□□□ -0.65
PTBP3-208	ENST00000487997	hCG_1642624	A0A1W2PR95	340 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	KBTBD13	C9JR72	458 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	CPLX1	O14810	134 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	CCT2	P78371	535 aa	Known RBP	10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	TOB2	Q14106	344 aa	Predicted RBP	10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	SLC35G1	Q2M3R5	365 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	CCDC144B	Q3MJ40	725 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	CPLX2	Q6PUV4	134 aa	Known RBP	10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	EEPD1	Q7L9B9	569 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	SMARCC2	Q8TAQ2	1214 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	TBC1D5	Q92609	795 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	ZNF274	Q96GC6	653 aa	Predicted RBP	10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	TAAR1	Q96RJ0	339 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	IWS1	Q96ST2	819 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	VTA1	Q9NP79	307 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	XPNPEP3	Q9NQH7	507 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997		V9GY48	417 aa	Predicted RBP	10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	CNTNAP5	Q8WYK1	1306 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	ALPK3	Q96L96	1907 aa		10.97	□□□□□ -0.65
PTBP3-208	ENST00000487997	hCG_1984214	I3L0E3	225 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	PDIA3	P30101	505 aa	Known RBP	10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	CDC27	P30260	824 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	HOXA13	P31271	388 aa	Predicted RBP	10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	ADD1	P35611	737 aa	Known RBP	10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	HSD17B4	P51659	736 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	NEK4	P51957	841 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	EVC	P57679	992 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	TNFAIP2	Q03169	654 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	STXBP2	Q15833	593 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	IQSEC1	Q6DN90	963 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	RNF180	Q86T96	592 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	FCHSD1	Q86WN1	690 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	TRIM22	Q8IYM9	498 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	ZNF713	Q8N859	430 aa	Predicted RBP	10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	MORC4	Q8TE76	937 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	PAWR	Q96IZ0	340 aa	Known RBP	10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	C11orf49	Q9H6J7	331 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	PSTPIP2	Q9H939	334 aa		10.96	□□□□□ -0.65
PTBP3-208	ENST00000487997	DOCK5	Q9H7D0	1870 aa		10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	NID2	Q14112	1375 aa		10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	ASTN1	O14525	1302 aa		10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	DNM1L	O00429	736 aa		10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	DUSP11	O75319	330 aa	Known RBP	10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	EIF2AK2	P19525	551 aa	Known RBP	10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	NAPA	P54920	295 aa		10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	GHRHR	Q02643	423 aa		10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	STK3	Q13188	491 aa		10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	GJC2	Q5T442	439 aa	Predicted RBP	10.95	□□□□□ -0.66
PTBP3-208	ENST00000487997	FBXO16	Q8IX29	292 aa	Predicted RBP	10.95	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms