RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 CHAMP1Q96JM3 812 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 PORCNQ9H237 461 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 SLC5A4Q9NY91 659 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 COL20A1Q9P218 1284 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 CPA4Q9UI42 421 aa11.98□□□□□ -0.49
HLA-DMB-261ENST00000487996 TBX3O15119 743 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 MARCH6O60337 910 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 OR52Z1P0C646 297 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 CCND2P30279 289 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 VEGFBP49765 207 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 CALCRLQ16602 461 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 Q4G0T1 1027 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 NIPA1Q7RTP0 329 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 SLFN12Q8IYM2 578 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 MBOAT7Q96N66 472 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 TAAR1Q96RJ0 339 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 PDCD2LQ9BRP1 358 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 CFHR5Q9BXR6 569 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 RAB34Q9BZG1 259 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 EFCC1Q9HA90 598 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 PEX10O60683 326 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 CUTAO60888 179 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 TDP2O95551 362 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 MBD3O95983 291 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 EIF2AK2P19525 551 aaKnown RBP11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 PGM5Q15124 567 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 TMEM266Q2M3C6 531 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 SKOR2Q2VWA4 1001 aaPredicted RBP11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 CEP55Q53EZ4 464 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 ADALQ6DHV7 355 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 GPR142Q7Z601 462 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 PLEKHH3Q7Z736 793 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 FAM133AQ8N9E0 248 aa11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 SRPRBQ9Y5M8 271 aaKnown RBP11.97□□□□□ -0.49
HLA-DMB-261ENST00000487996 PLXNB2O15031 1838 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 THSD7BQ9C0I4 1608 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 ZNFX1Q9P2E3 1918 aaKnown RBP11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 DNAJC25-GNG10A0A024R161 153 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 A0A1W2PQ27 194 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 A0A1W2PQ64 194 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 A0A1W2PQD8 194 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 SLC15A5A6NIM6 579 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 NR3C2P08235 984 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 PTPREP23469 700 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 MARCKSP29966 332 aaPredicted RBP11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 PRR16Q569H4 304 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 DTHD1Q6ZMT9 781 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 CDHR1Q96JP9 859 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 FAM20AQ96MK3 541 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 LMBRD1Q9NUN5 540 aa11.96□□□□□ -0.49
HLA-DMB-261ENST00000487996 ZNF236Q9UL36 1845 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 ASB14A6NK59 587 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 WNT7AO00755 349 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 MAFGO15525 162 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 ADORA2AP29274 412 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 LONP1P36776 959 aaKnown RBP11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 ALDH5A1P51649 535 aaPredicted RBP11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 GRB14Q14449 540 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 STXBP2Q15833 593 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 GNPTABQ3T906 1256 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 NLRX1Q86UT6 975 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 VSIG10LQ86VR7 867 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 SOCS4Q8WXH5 440 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 MXRA8Q9BRK3 442 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 PCDHA7Q9UN72 937 aa11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 DIS3Q9Y2L1 958 aaKnown RBP11.95□□□□□ -0.5
HLA-DMB-261ENST00000487996 FAM86B1E9PN63 330 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 MEIS1O00470 390 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 FOXN1O15353 648 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 SLC37A4O43826 429 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 FAM86B2P0C5J1 330 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 MYCLP12524 364 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 TXLNAP40222 546 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 UBXN2AP68543 259 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 CNTN2Q02246 1040 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 PDE4DQ08499 809 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 KIF22Q14807 665 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 DPP9Q86TI2 863 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 PLA2G4DQ86XP0 818 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 C4orf32Q8N8J7 132 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 GPRASP2Q96D09 838 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 AK8Q96MA6 479 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 MTMR9Q96QG7 549 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 KCNMB3Q9NPA1 279 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 FBXO2Q9UK22 296 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 LCTP09848 1927 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 IGLV3-22A0A075B6J6 115 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 VWA3AA6NCI4 1184 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 TNPO2O14787 897 aaKnown RBP11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 EDIL3O43854 480 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 EIF3JO75822 258 aaKnown RBP11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 CMA1P23946 247 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 EDNRBP24530 442 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 FCGRTP55899 365 aa11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 MAP2K1Q02750 393 aaPredicted RBP11.94□□□□□ -0.5
HLA-DMB-261ENST00000487996 MTMR1Q13613 665 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms