RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 DDAH1O94760 285 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 DNAJB2P25686 324 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MRPL12P52815 198 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 STXBP2Q15833 593 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SEPT14Q6ZU15 432 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 TMEM199Q8N511 208 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 AFG1LQ8WV93 481 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 EMID1Q96A84 441 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CTAGE1Q96RT6 745 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 IL23AQ9NPF7 189 aa13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
RAB11FIP3-210ENST00000487899 KAT6AQ92794 2004 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 GH1P01241 217 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 NR3C2P08235 984 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CYP2C9P11712 490 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CCL23P55773 120 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PGM5Q15124 567 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 NECTIN1Q15223 517 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 NBPF20Q3BBV1 942 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 ARHGEF16Q5VV41 709 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CREB3L3Q68CJ9 461 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 NFRKBQ6P4R8 1299 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CATIPQ7Z7H3 387 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 KAT2BQ92831 832 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MAP3K14Q99558 947 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 ANO2Q9NQ90 1003 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 DDX41Q9UJV9 622 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 LOXHD1Q8IVV2 1947 aa13.01□□□□□ -0.33
RAB11FIP3-210ENST00000487899 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PNMA6FA0A0J9YX94 578 aa13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 EIF3JO75822 258 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 HOXD8P13378 290 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 BRDTQ58F21 947 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 HERVK_113Q902F9 699 aa13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 GPKOWQ92917 476 aaPredicted RBP eCLIP13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SCLYQ96I15 445 aa13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CDX2Q99626 313 aaPredicted RBP13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PBX4Q9BYU1 374 aa13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MAP3K20Q9NYL2 800 aaKnown RBP13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MRVI1Q9Y6F6 885 aa13□□□□□ -0.33
RAB11FIP3-210ENST00000487899 GRXCR1A8MXD5 290 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 KPNA6O60684 536 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 F2P00734 622 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 ZNF286BP0CG31 522 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 RXRAP19793 462 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 UBA1P22314 1058 aaKnown RBP12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MCM5P33992 734 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PBX2P40425 430 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 LIFRP42702 1097 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 FAM47CQ5HY64 1035 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SESTD1Q86VW0 696 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SAMD3Q8N6K7 520 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PPTC7Q8NI37 304 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PIBF1Q8WXW3 757 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MYLIPQ8WY64 445 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 LRRC2Q9BYS8 371 aa12.99□□□□□ -0.33
RAB11FIP3-210ENST00000487899 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 POLR2MP0CAP2 368 aa12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MYCLP12524 364 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MRPS9P82933 396 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PTPN11Q06124 597 aaPredicted RBP12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SEMA3FQ13275 785 aa12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CASC1Q6TDU7 716 aa12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 RAB11FIP4Q86YS3 637 aa12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SRBD1Q8N5C6 995 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 DHX38Q92620 1227 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 TIFAQ96CG3 184 aa12.98□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 RBAK-RBAKDNI3L0D1 243 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 HAS3O00219 553 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SUPT20HL2P0C7V6 817 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CCND2P30279 289 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 KIF5BP33176 963 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SP2Q02086 613 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 TRAF1Q13077 416 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 HSDL1Q3SXM5 330 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MYSM1Q5VVJ2 828 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 GDF6Q6KF10 455 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 OTOP2Q7RTS6 562 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 FCHSD1Q86WN1 690 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 CMTR1Q8N1G2 835 aaKnown RBP12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 INPP4AQ96PE3 977 aaPredicted RBP12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 GTF2IRD1Q9UHL9 959 aa12.97□□□□□ -0.33
RAB11FIP3-210ENST00000487899 RALGAPA2Q2PPJ7 1873 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 PIK3CDO00329 1044 aa12.96□□□□□ -0.33
RAB11FIP3-210ENST00000487899 MEIS2O14770 477 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms